Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0299 ATGCTAGAGGCAATGGAAAGTTCGGTCAATGGTGGCTTCTCCCATTTGCAGAGCTGTGGAGATAGCAGCGAAGAAGAGTTATCGGTGCTTCCTCGTCACACCAAAGTTGTCGTAACCGGAAATAACCGCACCAAATCGGTGCTCGTTGGTCTTCAAGGTGTCGTTAAGAAAGCCGTTGGACTAGGCGGATGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTTAAGCTACAAAGGAATGCTCTTAGCGTGATTGAAGCACCCACCGGTAATGAGGAAGACGATGACCTTGAGTTTGAAAATATGCCGTGGAATGGATCAGATATGGCATCGGACGACACACACAAGTCCCACAAGTCGAGGCATAGAATGCATAGAACATTGGGATCATCTCACAAAACCACGAGTAGGTCCTTCTCTGCCGATTCACAGTCAAAGGGGTCCGTTTCTATGCCGCTTCATGGCTCCACGAAGGTGGACTTGAGCAAACTTGAAATGGCTGCACTGTGGAGATATTGGCGACATTTTAATCTAGTGGATGCGTTCCCAAACCCATCAAAAGAGCAGCTAGTAGACGTTGTTCAGAGGCATTTCATGTCGCAGCAAATGGACGAATTGCAGGTGATTGTGGGATTTGTCCAAGCTGCAAAGAGGCTTAAGACAGTGTGGAAATGA 675 0.4741 MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMPWNGSDMASDDTHKSHKSRHRMHRTLGSSHKTTSRSFSADSQSKGSVSMPLHGSTKVDLSKLEMAALWRYWRHFNLVDAFPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVWK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0299 224 Gene3D - 138 224 IPR038291 -
Gso4g0299 224 PANTHER SAP30 1 223 IPR024145 -
Gso4g0299 224 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 217 IPR025718 GO:0005515
Gso4g0299 224 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 223 - -
Gso4g0299 224 MobiDBLite consensus disorder prediction 107 152 - -
Gso4g0299 224 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0299 Gso-Chr4 2700004 2705016 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0299 - - gmx:100787225 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0299 4 2700004 2705016 Gso4g0299 4 2700004 2705016 ECH
Gso4g0299 4 2700004 2705016 Gso6g0283 6 2635534 2640890 GST