Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0296 ATGCCCTTTGCCACCAAGCTTCCACCGGCTCCGGAACCGCCAGCTATCTTGAAACCTGCCGGAAACAGAGTAACCGTTTCCCAAGAGCCGAAACAGAAGAAGAAGGAGAACAGCGTGAAGACCAGTCCACAGCGTCCCCCGCAAATTCTGAACACCGTTGTGCAAAGCAACGTGTCTTTGGACAGCACGTGTTCCTCAGATAGCAATTCATCAACCAAAAAGGTGAAGCCCGCAACCGCAACTGTGGCGAGTAGGAGAAACGTGAAGCGTAACGGGTTTAAGCCGGTAAGGGTTGTGCCAGACGCCGTCGATGTAGCAACAGTGTTGCCGCCTCTTAAGAGATGTGAATGGATCACTCCAAATTCTGACCCCCTTTACACTGCTTTCCACGATGAAGAATGGGGTGTTCCAGTTGATGATGATAGGAAGCTATTTGAGCTTCTAGTCTTTTCACAAGCATTGGCAGAACACCGTTGGCCAGCAATCCTTAACCAGAGAGACATATTCAGGAAGCTTTTTGAAAATTTTGAACCATCATCAGTTGCACAGTTTACTGAGAAGAAATTGCTAACACTGAAAATAAACGGCAACTCATTGTTATCAGAACCAAAGCTCCGTGCCATTGTGGAAAATGCTAAACAATTACTTAAGGTTCAGCAGGAGTTTAGTTCATTCAGCAATTACTGCTGGAGATTTGTTAACCACAAACCGATAAGAAATGAATTCAGATATGGACGTCAAGTACCCGTGAAGACTCCGAAAGCTGAAGTGATTAGCAAGGACATGATGCGTAGAGGTTTCCAATGTGTGGGACCAACAGTAGTTTATTCGTTCATGCAAGTAGCAGGCCTCGTTAATGACCACCTATTAACATGCTTCAAGCACCACAAATGCAAAGTGACAACCAAAAACGAATTTAAAACTGAGGTTAAGGAGAACAATGAAACTTCGGAGATGACAATAAACAATGACCGAAGGTCGTTTAATTGA 990 0.4475 MPFATKLPPAPEPPAILKPAGNRVTVSQEPKQKKKENSVKTSPQRPPQILNTVVQSNVSLDSTCSSDSNSSTKKVKPATATVASRRNVKRNGFKPVRVVPDAVDVATVLPPLKRCEWITPNSDPLYTAFHDEEWGVPVDDDRKLFELLVFSQALAEHRWPAILNQRDIFRKLFENFEPSSVAQFTEKKLLTLKINGNSLLSEPKLRAIVENAKQLLKVQQEFSSFSNYCWRFVNHKPIRNEFRYGRQVPVKTPKAEVISKDMMRRGFQCVGPTVVYSFMQVAGLVNDHLLTCFKHHKCKVTTKNEFKTEVKENNETSEMTINNDRRSFN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0296 329 Gene3D Hypothetical protein; domain 2 112 296 - -
Gso4g0296 329 Pfam Methyladenine glycosylase 121 295 IPR005019 GO:0006284|GO:0008725
Gso4g0296 329 PANTHER OS04G0501200 PROTEIN 9 318 - -
Gso4g0296 329 MobiDBLite consensus disorder prediction 1 16 - -
Gso4g0296 329 MobiDBLite consensus disorder prediction 1 80 - -
Gso4g0296 329 SUPERFAMILY DNA-glycosylase 113 298 IPR011257 GO:0003824|GO:0006281
Gso4g0296 329 MobiDBLite consensus disorder prediction 41 78 - -
Gso4g0296 329 PANTHER DNA GLYCOSYLASE SUPERFAMILY PROTEIN 9 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0296 Gso-Chr4 2669594 2673098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0296 K01246 - gmx:100801163 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0296 4 2669594 2673098 Gso4g0296 4 2669594 2673098 ECH
Gso4g0296 4 2669594 2673098 Gso6g0280 6 2602212 2605517 GST