Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0287 ATGGCATCCTCCGCTCTCATCTCCGACACCCAGCAATGGAAGGACCTCAAGGCACATGTGGAGGACATCAATAAAACACATCTTCGCGATCTATTGAGCGATGATAAGCGGTGCCAGTCCATGCTCGTTGAATTCGATGACATTCTGTTGGACTATTCAAGGCAACAAGCCACTCCTGAAACTATCCAGAAGCTATTTGAATTAGCGGAGGCTGCATCGCTCAAAGAAAAGATTATCCGCATGTACAGTGGGGAACATATAAATAGCACAGAAAATAGATCAGTGCTTCATGTCGCTCTTCGAGCTTCAAGGGATGCTGTCATACAGAGTGATGGGCAGAATGTTGTCCCTGAAGTTTGGAAAGTTCTTGACAAGATCCAGGAGTTCTCTGAGCAGATTCGCAATGGTTCTTGGGTTGGTGCTACAGGAAAGGCTTTGAAGGACGTTGTTGCAATTGGTATTGGGGGAAGCTTCTTAGGTCCACTGTTTGTACACACTGCACTTCAAACAGACCCCGAAGCTGTTGAATCTGCAAGGGGTCGTCAGCTGCGCTTTCTTGCAAATGTTGATCCTATTGACGTGGCTAGAAATATCACAGGATTAAATCCTGAAACAACACTTGTTGTGGTTGTTTCAAAGACTTTTACAACTGCTGAGACTATGCTGAATGCTCGAACTCTTAGAGAATGGATTTCATCAGCACTTGGGCCCTCTGCAGTTGCAAAGCATATGGTGGCTGTTAGCACAAATCTCACGCTTGTGGAAAAGTTTGGTATTGATCCTAAAAATGCTTTTGCATTTTGGGATTGGGTCGGTGGTCGGTATAGTGTTTGCAGTGCTGTTGGAATTTTGCCATTATCTCTACAATACGGTTTCTCTGTGATAGAGAAGTTCTTAAGGGGGGCTTCAAGCATTGATCAACATTTCTATTCGCAGCCATTTGAAAGCAATATACCTGTGCTTCTGGGTTTGTTGAGCATATGGAATGTTACATTTCTTGGATATCCTGCCAGAGCCATCTTACCTTATAGTCAAGCTCTGGAGAAGTTTGCCCCACACATTCAACAGGTTAGCATGGAGAGTAATGGAAAGGGTGTCTCGATTGATGGCGTCCCTCTACCATTTGAGGCTGGTGAAATTGATTTTGGTGAACCTGGAACTAATGGGCAGCATAGCTTTTATCAGCTCATACATCAGGGGCGTGTAATTCCTTGTGATTTTATTGGAGTTGTGAAAAGTCAGCAACCTGTCTTTCTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTAATGTCCAACTATTTTGCACAGTCTGATGCCCTTGCATATGGGAAGACAGCTGAGCAGCTACAAAAGGAGAATGTTTCCCCACACCTTATTCCTCACAAGACATTCAGCGGCAATCGACCTTCTCTCAGCCTACTGCTTCCATCATTGAATGCTTATAATATTGGGCAGTTGTTGGCAATCTATGAACACAGAATTGCTGTAGAGGGTTTCATTTGGGGAATCAATTCTTTTGATCAGTGGGGAGTAGAGCTGGGGAAGTCACTGGCTACTCAAGTCAGAAAGCAACTTAATGCATCTCGTACTAAAGGAGAACCAGTTCAGGGCTTTAATTTCAGTACTACAACAATGTTGACAAGATATCTTCAGGCAAGTTCAGATGTCCCAGCGGATCTGCCAACTGTTTTACCGAAGATCTAA 1707 0.44 MASSALISDTQQWKDLKAHVEDINKTHLRDLLSDDKRCQSMLVEFDDILLDYSRQQATPETIQKLFELAEAASLKEKIIRMYSGEHINSTENRSVLHVALRASRDAVIQSDGQNVVPEVWKVLDKIQEFSEQIRNGSWVGATGKALKDVVAIGIGGSFLGPLFVHTALQTDPEAVESARGRQLRFLANVDPIDVARNITGLNPETTLVVVVSKTFTTAETMLNARTLREWISSALGPSAVAKHMVAVSTNLTLVEKFGIDPKNAFAFWDWVGGRYSVCSAVGILPLSLQYGFSVIEKFLRGASSIDQHFYSQPFESNIPVLLGLLSIWNVTFLGYPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVFLKGEVVSNHDELMSNYFAQSDALAYGKTAEQLQKENVSPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLNASRTKGEPVQGFNFSTTTMLTRYLQASSDVPADLPTVLPKI* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0287 568 Gene3D - 97 296 - -
Gso4g0287 568 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 7 554 IPR001672 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 SUPERFAMILY SIS domain 8 554 IPR046348 GO:0097367|GO:1901135
Gso4g0287 568 ProSitePatterns Phosphoglucose isomerase signature 1. 269 282 IPR018189 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 ProSitePatterns Phosphoglucose isomerase signature 2. 499 516 IPR018189 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 Gene3D - 509 554 IPR023096 GO:0004347|GO:0006096
Gso4g0287 568 CDD SIS_PGI_1 120 288 IPR035476 -
Gso4g0287 568 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 7 554 - -
Gso4g0287 568 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 10 553 IPR001672 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 PRINTS Glucose-6-phosphate isomerase signature 149 168 IPR001672 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 PRINTS Glucose-6-phosphate isomerase signature 265 283 IPR001672 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 PRINTS Glucose-6-phosphate isomerase signature 343 364 IPR001672 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 PRINTS Glucose-6-phosphate isomerase signature 467 485 IPR001672 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 PRINTS Glucose-6-phosphate isomerase signature 485 499 IPR001672 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 PRINTS Glucose-6-phosphate isomerase signature 499 512 IPR001672 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 Hamap Glucose-6-phosphate isomerase [pgi]. 45 526 IPR001672 GO:0004347|GO:0006094|GO:0006096
Gso4g0287 568 Gene3D - 12 508 - -
Gso4g0287 568 CDD SIS_PGI_2 336 522 IPR035482 -
Gso4g0287 568 Pfam Phosphoglucose isomerase 51 546 IPR001672 GO:0004347|GO:0006094|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0287 Gso-Chr4 2575475 2584129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0287 K01810 - gmx:100807719 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0287 4 2575475 2584129 Gso4g0287 4 2575475 2584129 ECH
Gso4g0287 4 2575475 2584129 Gso6g0266 6 2499035 2511423 GST