Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0285 ATGGCGGCGGAGATACCGTGCTGTGGAACAAAGTTTTCACTGTACGTTTTGGTGATCATAGGTTTGGTCTGCTTCGCGGGACTAATGGCTGGTCTCACTCTCGGACTCATGTCTTTGGGACTCGTCGACCTCGAAGTTCTCATCAAATCTGGTCGTCCTCAGGATCGCATCCACGCTTCGAAAATTTATCCGGTTGTTAAGAACCAGCATCTTCTGCTTTGCACGCTTTTAATTGGAAACTCCTTAGCCATGGAGGCTCTTCCCATTTTTCTTGATTCACTGGTGCATCCCGCTGCGGCAATCTTGATTTCGGTCACGCTCATCCTCATGTTTGGAGAGATATTGCCCCAAGCAATTTGTACAAGATATGGATTGACGGTTGGAGCCACGCTGGCTCCACTTGTTCGGGTTCTTCTTATAGTTTTCTTCCCGCTTTCTTATCCTATCAGCAAGGTTCTTGATTGGATGTTGGGTAAAGGACATGCTGCCCTTTTAAAGAGGGCAGAGCTCAAGACTTTTGTGAATTTTCATGGAAATGAGGCTGGTAAAGGAGGAGATTTAACTCATGACGAGACAACCATCATAACTGGTGCACTTGACTTGACAGAAAAGACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACACTGAATTCAATAATGACAATTGGTCATAGTAGAGTTCCAGTTTATGCAGGAGAAAAAACCAATATTATTGGACTTGTTCTGGTTAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCCCTAAGAAAAATGCTCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCTGTACGATATACTGAACGAATTTCAGAAGGGTCACAGTCATATTGCAGTTGTGTATAGGGACCTAAATGATAAAAATGAAGCCCCAAAAAAAGTTAAAGATGGGGAACTACTTGATCTTAAGGACAAGCGTAAGAATAAAGGAGAGAAGACATCCTTGGATAAAGGTGAGAAATTGGAGTCGCATTATTCTTTGACTACAGATGGTGCTCAGCAAGCAAAGAAAAGTCCACCAGCAACTCCTGCTTTTAAAAAGCGACATAGAGGTTGTTCATATTGCATCCTGGACCTTGATAATTCTCCCCTGCCAGTGTTTCCTCCCAATGAAGTGGTTGTTGGTGTTATTACAATGGAGGATGTCATTGAAGAGCTTCTTCAGGAGGAGATACTAGATGAAACTGATGAATATGTCAATATCCATAACAAGATAAAAGTTAACATGAATGCTTCTAAGGAGAAGGCTCCTGATGCAAATATGTTGCTGCCTTCACAAGCAGTTCAAGGACACACACCAACTAATTCAATTTCTACAGCTACTTCTGCAACGGGCTCACCTACCACAATTGATCTAATCTCAGAAAGTGAGTCACTAAGGAATCGATAA 1464 0.4214 MAAEIPCCGTKFSLYVLVIIGLVCFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQDRIHASKIYPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVHPAAAILISVTLILMFGEILPQAICTRYGLTVGATLAPLVRVLLIVFFPLSYPISKVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALDLTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTIGHSRVPVYAGEKTNIIGLVLVKNLFMVDSKAAVPLRKMLIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNDKNEAPKKVKDGELLDLKDKRKNKGEKTSLDKGEKLESHYSLTTDGAQQAKKSPPATPAFKKRHRGCSYCILDLDNSPLPVFPPNEVVVGVITMEDVIEELLQEEILDETDEYVNIHNKIKVNMNASKEKAPDANMLLPSQAVQGHTPTNSISTATSATGSPTTIDLISESESLRNR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0285 487 MobiDBLite consensus disorder prediction 453 487 - -
Gso4g0285 487 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Gso4g0285 487 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Gso4g0285 487 Gene3D - 189 324 IPR046342 -
Gso4g0285 487 Gene3D - 372 419 IPR046342 -
Gso4g0285 487 SUPERFAMILY CBS-domain pair 196 308 IPR046342 -
Gso4g0285 487 MobiDBLite consensus disorder prediction 453 481 - -
Gso4g0285 487 MobiDBLite consensus disorder prediction 334 371 - -
Gso4g0285 487 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 469 IPR045095 GO:0010960
Gso4g0285 487 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 469 - -
Gso4g0285 487 MobiDBLite consensus disorder prediction 334 349 - -
Gso4g0285 487 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0285 Gso-Chr4 2559526 2563953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0285 K16302 - gmx:100527789 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0285 4 2559526 2563953 Gso4g0285 4 2559526 2563953 ECH
Gso4g0285 4 2559526 2563953 Gso6g0264 6 2484925 2489214 GST