Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0284 ATGTCAGATAAAGAAGTAGTAGTAAATGGGTTATCTGAGGACCAAGCATGGCAAGAGCTCAAGTTTCCAGAGTTGTTGAACAGTGATGCTGTTAGAGAAATCCATGCAACTATTGAAAAAGAATGGGATTTTCTTCAAAGGTCAGCTTGCCAAACCGCTGCGGGAAGGGCTCTGTGGAAGCATGCCATCCATGATCCACTGGCTGACGTGCTGGCAGGAGAGACTTACTTGAGAAACCTCCATGAAAAGATCAAGAAAGACATTCTCAACAATGCTCGCGAAACTTCCGGAGTCATTCTCGCGGTTCGAACCCTTTGGTTTGATTCTAGACTAGAAGATGCCCTTAATTCCATTGATGGCAGACAAGCACAGGTTGTTCTCCTTGGTGCAGGAATGGACACGAGAGCATATCGTTTGAGTTGCTTGAAGGACAGCGATGTCTTTGAGGTTGACTTTCCACAAGTATTGGATGTAAAAACCACTATTTTACAAGCGGCTAAGGACTCCTCAAACGACTGCCAGCATATAATGTCCAAAGCCAAATCCTTAACCAGAGTAGCAGCTGACATAAGAGAAAGTGACTGGTTGGAAAAGCTTGAGATTGCAGGGTACTTGCCTCAGAAGAACACTGTTTGGATTCTAGAAGGCATCCTTTATTACCTCACCCAATCCCACGCCATGCAAGTGCTGAGGATTTTGGCTAACAAATGCGCCCTAACCCACACAGTCCTCTTAGCAGACTTCATGAATAAGCCATCTACCACTCTATCCAATTCAGCTTTCCAATTTTATAGCGATTGGCCAGACCAACTCTTGCCATCCATTGGCTTCAATCATGTAAAACTTTCGCAAATTGGAGACCCAGATGCTCATTTTGGCCTCTTGAATGATCCCTTAAATCTCTTCAACAAGCTCCGCAGCTTGCCAAGATCGTTACAAACCAATCCAGACGATGGAACGCCATGCTGTCGATTGTACTTGGTGGAAGCTTCTGGTTCACCTGACCAAAATGCTTCAAATAATGGACCAATCACTCAGACCTGA 1044 0.4483 MSDKEVVVNGLSEDQAWQELKFPELLNSDAVREIHATIEKEWDFLQRSACQTAAGRALWKHAIHDPLADVLAGETYLRNLHEKIKKDILNNARETSGVILAVRTLWFDSRLEDALNSIDGRQAQVVLLGAGMDTRAYRLSCLKDSDVFEVDFPQVLDVKTTILQAAKDSSNDCQHIMSKAKSLTRVAADIRESDWLEKLEIAGYLPQKNTVWILEGILYYLTQSHAMQVLRILANKCALTHTVLLADFMNKPSTTLSNSAFQFYSDWPDQLLPSIGFNHVKLSQIGDPDAHFGLLNDPLNLFNKLRSLPRSLQTNPDDGTPCCRLYLVEASGSPDQNASNNGPITQT* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0284 347 Gene3D Vaccinia Virus protein VP39 39 293 IPR029063 -
Gso4g0284 347 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 17 330 - -
Gso4g0284 347 Pfam Leucine carboxyl methyltransferase 49 232 IPR007213 GO:0008168|GO:0032259
Gso4g0284 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 46 328 IPR029063 -
Gso4g0284 347 TIGRFAM mthyl_TIGR00027: methyltransferase, TIGR00027 family 60 249 IPR011610 GO:0008168
Gso4g0284 347 PANTHER LEUCINE CARBOXYL METHYLTRANSFERASE 17 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0284 Gso-Chr4 2552141 2554174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0284 - - gmx:100801340 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0284 4 2552141 2554174 Gso4g0284 4 2552141 2554174 ECH
Gso4g0284 4 2552141 2554174 Gso6g0263 6 2477329 2479515 GST