Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0275 ATGCTAGGAGTCTACAGAATACTGCGACTTCGCCAAAACCCTCAAAGGGGCGCAATATTTCAACAATTCCAAGGGAAGGGAATCCTTAACCTAAACAAAATATATTCAAAATTTGGATGTGCCACGTCCTCTCCACGCATGCAGCAGAAAGGATTGGAGAATGTCACAGTGTCAGAGGTACTAATGACAAAAGGGGAAGCAAATGTTGGTTCCTGGCTCTGGTGCCGAGTTGATGATGCTGTTATCAACGCAATGAAGAACATGGCTGATAATAACATTGGATCATTGGTGGTACTAAAGCCAGAGGGGCAGCATATAGCAGGCATTATCACAGAAAGAGACTGCTTGAAAAAAATAGTTGCACAAGGAAGATCTCCCTTGCACACACATGTTGGTCAAATAATGACTGATGAGAATAACCTGATAACGGTGACCTCCAACACCAACATTCTTCAAGCAATGAAAATTATGACAGAGAATCATATCCGGCATGTTCCTGTTATAGATGGAAAAATAGTTGGCATGATTTCCATTGTAGATGTGGTGCGAGCAGTGATGGAGCAGCAGAGTGGAGAACTGAAGCGACTCAATGACTACGTCAGAGGAGAATACTATTAG 618 0.4272 MLGVYRILRLRQNPQRGAIFQQFQGKGILNLNKIYSKFGCATSSPRMQQKGLENVTVSEVLMTKGEANVGSWLWCRVDDAVINAMKNMADNNIGSLVVLKPEGQHIAGIITERDCLKKIVAQGRSPLHTHVGQIMTDENNLITVTSNTNILQAMKIMTENHIRHVPVIDGKIVGMISIVDVVRAVMEQQSGELKRLNDYVRGEYY* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0275 205 Pfam CBS domain 73 120 IPR000644 -
Gso4g0275 205 Pfam CBS domain 131 186 IPR000644 -
Gso4g0275 205 ProSiteProfiles CBS domain profile. 62 127 IPR000644 -
Gso4g0275 205 SMART cbs_1 71 120 IPR000644 -
Gso4g0275 205 SMART cbs_1 140 186 IPR000644 -
Gso4g0275 205 ProSiteProfiles CBS domain profile. 135 193 IPR000644 -
Gso4g0275 205 Gene3D - 50 204 IPR046342 -
Gso4g0275 205 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN 1 204 - -
Gso4g0275 205 CDD CBS_pair_bac_euk 75 183 IPR044725 -
Gso4g0275 205 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 1 204 - -
Gso4g0275 205 SUPERFAMILY CBS-domain pair 53 192 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0275 Gso-Chr4 2496438 2498115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0275 - - gmx:100795329 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0275 4 2496438 2498115 Gso4g0275 4 2496438 2498115 ECH
Gso4g0275 4 2496438 2498115 Gso6g0255 6 2430024 2431694 GST