Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0240 ATGGGAGCTCTCACTTCATTCGCCTCTTGGATTCCCGAGGACGATCTTCTTCTCAAGAACGCCGTTGAGGCTGGTGCTTCACTAGAATCGCTTGCGAAAGGTGCAGTGCAGTTTTCTCGAAAATATAGTCTTAAAGAGATACAGGATCGGTGGTATTCTCTCCTCTATGATCCTGTCATTTCTGCTGAAGCCGCGGCCGGTATGACAAACTTTGAGCTTTCGGCTTCGCCTCTCCCATCAAAGTTCTATAGGTTTGGACACTTGAAAGAACGGAAAGTTGTTTCTGCTACAAGAAAGTCCGAGAGTGTTCGCAATTTGTATTATGCCAGGTGCAAAAGAATCCGCAATAGCATGTTAACTTCCATGGACTTAAGTTTTCTAGTTGATTCGGAAAATGGTAACTATGCAGTGCATGGGAGTGATCCTTTATCTGGAAACTGCATGCCTGAAGGTGGAACTTCTAATCATTTTTCAAGTCTTGATCCTGCTCAGTATGCTTTTCCTGAAAATTTGATGGATGATAATGTTGCTTCTGATAGAGTTGCTGCTGGTGTGTTTTGCCATGGAGTTGACAATGCAGTTGAAGAGAATTTCCCTGTCGAGCTAAAGAGTGTACTTAAGGAAGAACCTCAGATTTTTGAAGACAATGTGCCTTTGGATGGAGTTGTTGAGGATTTGGATGTTCCTAATGAATTGGCTATAGATGGGTGGATTGGAGACGATGGTTTAGAGAGAATGCCTTTGTCCACATTGGATCATATCAACAATGACCCTGGAAATATGTGTCCTGAGTTTGATGAAAACAATGTATTTGATTCAGAGTTAGAGTGTGGAACATCATTTAACTTATCTTCACTTCATGAAATGCCAGTCTGGAGGACAGATGAGAGCATTCAAGAACACGATTTGCCATGTGATGGTTTTAATGATCCTATTGCTTGTGGGGATGCTTATTTGGAAGAACTGTCCAATTCTCTCCTCCACTTCAGTAGCGAGGAAGAACAGATTCTGATGGATGTTGATGGAGATGAAGGGATTGACAAGTCTTACTTTGATGGTCTGACTTCACTACTACAAAATTCTACAAATGATATTAATTCAGATCAGATCTCTAAAAAGGATGAAACAGAGTCGTTAATGGCCTCACAGGCACATGTTATAAATCAGTCAGTTTCATGTCACAAAGAATTGGATGACAACTCGGGGTCAAGCTCTCGTGGTTTACAAGTAGTTCACAAATTAGAGTTCCAAATGTCATCTTCTGTCTCGACTACAGACCCCCAATTTCCTGAACTAATTAATGAAAGTATGCCCTGTTCAATAAACACCGAGCACCAAGAAATTCCAGAAAATGATGACGTTTTTCTACCATTTGATGTGCCTCCTGTCATATTTCCCCCTTCATCTAAATTAATTTTCAAAGTATCCAATAAACCAATTTCTTCATCTGTTATTAAGCATAGAGCTAGTGAAAGAGGTAAAACTTTGATGCATGTAGAAAAGAAAAACCCTGCAGCACCTCATGTATCTTTTCAGATGATGGAATCTCCTTGCTTCCCAGGACCTGTTGGTGGTTCTAAGGTAAAATGTGAGTTGCCTGCTAATCATGCAGCACACACAGTGTCTAGGAGTTCTGTTATTGTTTCTGGTGGCTTAGGTGGAAATGATGCTGCAAACACAACAGATGCTCTTTTGCATGCAAATAAAAAGGAAGAAGCTACCAGCATTTGCTTGGCAAAGGATCCAAGCAATCATGTGGCAAATTCCTTCATGAAGAAATCAGCTGCTGATTCTAAAGACTTCAGAAATCATCCCCAACCTAATGGTTCTAGCATGAAAAATGAACAAGATTTACCCTTGCCACTTCAAGATGAGTTGCAACGTGCTGAACTGGGATACTCAGATGTTCTTGAGTCAGAGCTGGTGGCAAATCCTCCAGCATTAGATGAGGAAGAGCAATATATAGAGAGTGACGATGAGCTTCCTTCTTATTCTGACGTAGAGGCAATGGTACTTGATATGGACCTGGATCCTCATGATCACCAGGATTCTTATTATAATGAGGAAGTATCAAGATATCAACATGTGGAAAGTAAGAGAGCTATCATGAGGCTGGAACAAGGTTCCCATTCTTGTATTCAAAGAGCCATTGATTCACATGGAGCATTTGCCATTTTGTACAGTCGCCACTCAAAGCATTATATTAAGAAACCCGAGGTTTTACTTGGACGAGCAACTGAAAGTGTTCCTGTGGACATTGACTTGGGCAAAGGAGGGCATGGCAATGCAATATCTCGACGTCAGGCAATTATAAAGATGGCTAAAGATGGCACATTCTACATCAAAAACTTTGGCAAGAGTTCAATCCTTGTAAATAGCAAAGAAGTGCACACTGGTCAGTCTCAAAGACTGCATTCCAATTGTCTGGTTGAGGTGAGGGGCATGCCTTTGATATTTGACATAAATCAAAGTCGTGTGAAGCAGTACCTGGATTACATTTCTGACCATTCTCAGACCTTTTAG 2523 0.4102 MGALTSFASWIPEDDLLLKNAVEAGASLESLAKGAVQFSRKYSLKEIQDRWYSLLYDPVISAEAAAGMTNFELSASPLPSKFYRFGHLKERKVVSATRKSESVRNLYYARCKRIRNSMLTSMDLSFLVDSENGNYAVHGSDPLSGNCMPEGGTSNHFSSLDPAQYAFPENLMDDNVASDRVAAGVFCHGVDNAVEENFPVELKSVLKEEPQIFEDNVPLDGVVEDLDVPNELAIDGWIGDDGLERMPLSTLDHINNDPGNMCPEFDENNVFDSELECGTSFNLSSLHEMPVWRTDESIQEHDLPCDGFNDPIACGDAYLEELSNSLLHFSSEEEQILMDVDGDEGIDKSYFDGLTSLLQNSTNDINSDQISKKDETESLMASQAHVINQSVSCHKELDDNSGSSSRGLQVVHKLEFQMSSSVSTTDPQFPELINESMPCSINTEHQEIPENDDVFLPFDVPPVIFPPSSKLIFKVSNKPISSSVIKHRASERGKTLMHVEKKNPAAPHVSFQMMESPCFPGPVGGSKVKCELPANHAAHTVSRSSVIVSGGLGGNDAANTTDALLHANKKEEATSICLAKDPSNHVANSFMKKSAADSKDFRNHPQPNGSSMKNEQDLPLPLQDELQRAELGYSDVLESELVANPPALDEEEQYIESDDELPSYSDVEAMVLDMDLDPHDHQDSYYNEEVSRYQHVESKRAIMRLEQGSHSCIQRAIDSHGAFAILYSRHSKHYIKKPEVLLGRATESVPVDIDLGKGGHGNAISRRQAIIKMAKDGTFYIKNFGKSSILVNSKEVHTGQSQRLHSNCLVEVRGMPLIFDINQSRVKQYLDYISDHSQTF* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0240 840 MobiDBLite consensus disorder prediction 601 617 - -
Gso4g0240 840 ProSiteProfiles Forkhead-associated (FHA) domain profile. 740 796 IPR000253 GO:0005515
Gso4g0240 840 MobiDBLite consensus disorder prediction 594 617 - -
Gso4g0240 840 PANTHER MICROSPHERULE PROTEIN 1 1 836 IPR037912 GO:0002151|GO:0031011|GO:0071339
Gso4g0240 840 Pfam FHA domain 741 811 IPR000253 GO:0005515
Gso4g0240 840 Gene3D - 680 831 - -
Gso4g0240 840 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Gso4g0240 840 SUPERFAMILY SMAD/FHA domain 721 821 IPR008984 GO:0005515
Gso4g0240 840 PANTHER FHA DOMAIN PROTEIN 1 836 - -
Gso4g0240 840 SMART FHA_2 739 796 IPR000253 GO:0005515
Gso4g0240 840 CDD FHA 736 822 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0240 Gso-Chr4 2192851 2198636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0240 - - gmx:100786493 1670.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0240 4 2192851 2198636 Gso4g0240 4 2192851 2198636 ECH
Gso4g0240 4 2192851 2198636 Gso6g0217 6 2096637 2102829 GST