Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0234 ACACTTGCTTCTTTGGTTCTTCCAATCCCCAACTGTCCAACCAACCAGGGTACTTGTGTGGTCAAGAAAGAAATCAGTTTGGAGCGACCAGGCATCTCAGGCACCTCAATTCGGCCTGATGGAAAAATTGCTGCAACTGCTGGCTGGGACCACAGGTTGAGGATATATAATTACCGCAAAGGAAATGCTTTAGCTATTTTAAAGTATCACCATTGCACGTGCAATGCTGTAACTTATTCGTCCGATTGTAAACTTATGGCCTCTGCATCGGAAGACACAACCGTGGGACTATGGGAATTGTATCCTCCTCGAATATGA 318 0.4528 TLASLVLPIPNCPTNQGTCVVKKEISLERPGISGTSIRPDGKIAATAGWDHRLRIYNYRKGNALAILKYHHCTCNAVTYSSDCKLMASASEDTTVGLWELYPPRI* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0234 105 SMART WD40_4 18 57 IPR001680 GO:0005515
Gso4g0234 105 SMART WD40_4 60 99 IPR001680 GO:0005515
Gso4g0234 105 ProSitePatterns Trp-Asp (WD) repeats signature. 86 100 IPR019775 -
Gso4g0234 105 Gene3D - 12 104 IPR015943 GO:0005515
Gso4g0234 105 Pfam WD domain, G-beta repeat 64 98 IPR001680 GO:0005515
Gso4g0234 105 Pfam WD domain, G-beta repeat 36 57 IPR001680 GO:0005515
Gso4g0234 105 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 105 IPR001680 GO:0005515
Gso4g0234 105 PANTHER - 15 104 - -
Gso4g0234 105 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 67 105 - -
Gso4g0234 105 PANTHER TRANSDUCIN BETA-LIKE 3 15 104 - -
Gso4g0234 105 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 20 101 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0234 Gso-Chr4 2139790 2142132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0234 K24770 - gsj:114408293 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0234 4 2139790 2142132 Gso4g0234 4 2139790 2142132 ECH