Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0214 ATGCACCTCTCACCAGTGTTCACACGTGTCCTCCTAACACGTATTCATTCATGTCCCAACACACATTACATTACATTAGATTATCACGGGAAGAAGGACACAACACAAGTCAGAAGACAAGACAATCAATTGATTATTTTCTGTTCGGAAATGAAGGGTAGCAAGAGGCCCATCCACGCCGTCACGACATGGGTTCGGCGCCAACCGCCCAAGATAAAGGCCTTTCTCGCGGTGCTGTCTGCCCTTGCGGCCTTGCTCTTCCTCAGAATCGTCGTTCACGACCACGACAGCCTCTTCGTCGCCGCCGAGTTTGTCCATGCATTAGGAATCTCCGTCCTCATTTACAAACTCACCAAGGAAAAAACCTGTGCCGGGCTTTCGCTTAAATCGCAGGAGCTGACGGCTATGTTTCTGGGTGTTAGACTTTATTGCAGTTTTGTGATGGAATATGATATACACACCCTACTCGATATGGCAACCTTGGCCACCACCCTCTGGGTTATTTATATGATACGTTTCAAATTGAAATCTAGTTATATGGATGATAAGGACAACCTTGCAATATACTATGTGGTAATACCTTGTGCTGTGCTGTCCTTGTTAATTCATCCAACAACCCGGCATCATCCACTTAATAGGATTCTCTGGGCATTTTGTGTTTATCTTGAAGCTGTTTCTGTTCTCCCTCAGCTGCGGGTCATGCAGAACACTAAGATTGTTGAACCATTCACAGCACACTATGTTTTTGCTCTTGGAGTTGCAAGGTTCTTGAGTTGTGCACATTGGGTCCTCCAGGTATTAGATACTCGTGGACGTCTACTGACTGCATTGGGTTATGGATTGTGGCCTTCTATGGTTCTTCTATCAGAAATTGTCCAAACTTTCATTCTGGCAGATTTTTGCTACTACTACGTCAAGAGTCTTGTTGGGGGACAACTTGTTCTTCGACTTCCTTTAGGAGTGGTCTAA 969 0.452 MHLSPVFTRVLLTRIHSCPNTHYITLDYHGKKDTTQVRRQDNQLIIFCSEMKGSKRPIHAVTTWVRRQPPKIKAFLAVLSALAALLFLRIVVHDHDSLFVAAEFVHALGISVLIYKLTKEKTCAGLSLKSQELTAMFLGVRLYCSFVMEYDIHTLLDMATLATTLWVIYMIRFKLKSSYMDDKDNLAIYYVVIPCAVLSLLIHPTTRHHPLNRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPLGVV* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0214 322 PRINTS ER lumen protein retaining receptor signature 98 117 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso4g0214 322 PRINTS ER lumen protein retaining receptor signature 125 145 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso4g0214 322 PRINTS ER lumen protein retaining receptor signature 216 236 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso4g0214 322 PRINTS ER lumen protein retaining receptor signature 238 252 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso4g0214 322 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN 51 321 - -
Gso4g0214 322 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 51 321 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gso4g0214 322 Pfam ER lumen protein retaining receptor 122 264 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0214 Gso-Chr4 1930589 1934047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0214 55 322 Miscellaneous Gene Families AT2G21190 80.970 1.98e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0214 - K10949 gmx:100787747 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0214 4 1930589 1934047 Gso4g0214 4 1930589 1934047 ECH