Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0183 ATGGACAAATTGTATGGGTTGAGTCATCTCTTCATGACAGTGTTTCTTCATAACTTCTCCATGTTCATGGTGGTACCAGCCATCACCGATGTCACAATGGCTGCTCTTTGTCCCGGACAAGATGAATGCTCACTTGCCATCTACATCACTGGTTTTCAACAAGCGATGATAGGGCTGGGCACGCTTGTGATGATGCCACTATTGGGAAATCTTTCGGATAAGTATGGGAGGAAGGCCATCCTCACACTCCCTATGATCCTCACAATCATTCCCGTAGGCATATTAGCTTACAGCAGGACGAAAAAATTCTTCTACGTCTACTATGTGTTTAAGATACTCATTTCAATGGTTTGCGAAGGAAGCGTTCCTTGCCTCGCCCTAGCTTACGTGGCAGATAACGTTCCAGAAAGTGGACGAAGCACTGTATTTGGAATTCTTTCAGGAATTGGGTCTGCCGCATTTGTGTGTGCCACCTTATCTGCTCGATTTTTATCATCAGCCCTAACTTTTCAAGTTTCTACACTTATCGCGGTGATTGGAGCACTATACATGCAATTTTTCCTTCGAGATTCAGTCATTGATGACAAGCACCTTTATACCCCAATCATATCACAAGGAAATCCCATAATATCTAAGGTCAATGGAAACTTGGAAAGTAAGAAGCATCTTTTGAAAGCATTGCGCTCCATAAAGGACCTAACTTCTTTCCTCAATAGCAGCTTGACCATTAATCAAGCAGCAATTGTTGCTTTCTTCAATAGCCTTGCAGATGTTGGCCTTCATGGATCATTGTTGTATTTTTTAAAGGCTCAATTTCACTTTGATAAGAATCAGTTTGCTGACTTGATGGTCATTTCTGGGATTGCAGGGACTGTGTCACAGCTTCTTCTTATGCCTATTTTGGCTCCTATTTTGGGCGAGACAAGACTACTCTCAGTTGGCCTATTCTTCCATTGTGTACATATGTTCCTTTACAGCATGGCATGGTCCTCCTTGGTTCCTTATGCTTCCGCCATGTTCTCAATTTTATATGTTTTCTCACACCCTTGTATACGAAGTATTGTATCTAAAGAAGCTGGTCCCCATGAGCAGGGAAAGGCTCAAGGTTGCATTTCAGGCATATGTTCAATTGCACATATTGTTTCTCCCTTGGTTTTCTCTCCATTAACAGCTCTATTCCTTTCTGAAAAGGCACCTTTTGATTTTCCTGGATTCAGTATAATGTGCATTGGATTTGCTTCGATGATATCTTTTGTTCAAAGTTTGATGCTTAGAGTGGCTCCTCCCATTTTGAATTAG 1299 0.4172 MDKLYGLSHLFMTVFLHNFSMFMVVPAITDVTMAALCPGQDECSLAIYITGFQQAMIGLGTLVMMPLLGNLSDKYGRKAILTLPMILTIIPVGILAYSRTKKFFYVYYVFKILISMVCEGSVPCLALAYVADNVPESGRSTVFGILSGIGSAAFVCATLSARFLSSALTFQVSTLIAVIGALYMQFFLRDSVIDDKHLYTPIISQGNPIISKVNGNLESKKHLLKALRSIKDLTSFLNSSLTINQAAIVAFFNSLADVGLHGSLLYFLKAQFHFDKNQFADLMVISGIAGTVSQLLLMPILAPILGETRLLSVGLFFHCVHMFLYSMAWSSLVPYASAMFSILYVFSHPCIRSIVSKEAGPHEQGKAQGCISGICSIAHIVSPLVFSPLTALFLSEKAPFDFPGFSIMCIGFASMISFVQSLMLRVAPPILN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0183 432 Gene3D MFS general substrate transporter like domains 7 419 IPR036259 -
Gso4g0183 432 Pfam Major Facilitator Superfamily 10 383 IPR011701 GO:0022857|GO:0055085
Gso4g0183 432 CDD MFS_SLC46_TetA_like 10 423 - -
Gso4g0183 432 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 6 427 - -
Gso4g0183 432 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 6 427 - -
Gso4g0183 432 SUPERFAMILY MFS general substrate transporter 10 417 IPR036259 -
Gso4g0183 432 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 432 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0183 Gso-Chr4 1615072 1624105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0183 2 432 Organic Solute Cotransporters AT2G16990 45.033 2.18e-118 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0183 - - gmx:100799551 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0183 4 1615072 1624105 Gso4g0183 4 1615072 1624105 ECH
Gso4g0183 4 1615072 1624105 Gso6g0166 6 1558199 1567263 GST