Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0157 ATGGCTCTTTCGATTTTTCAATTTCTTCTGTTCTCAATCAGCAATTTCTTCCTCGCTTCTTCTTTCCAAGATCTTCTTCTTCTCTCTGTTAATGCGCAATCACACAATCTCACTCAACCTTCAGTTACGCCAATCAACTTCGATCTCTACCATTCCAGTGGCAATTTGATGGAGGAGATCAGGGCCTTGGTCCATCGTCACCCAGATAAACTCACTATGGAGACAATTAAAGCTGGAAACAAAGGCTATGGTGCTGAGGTTTCAGTGGTTACTTATTGCAAGGAAAAGAAAGACAATGATGAGAGGTCGAAGCTTCGGATTCTTCTTAGTTTTGGGCAGCATGGAAGGGAGCTGATTACCACAGAACTTGCTTTAAGGATTTTGTCTATCTTAAGTGAAGAAAAATTTCTACCCAGCATGGATCAAGCTTCCTTAAACAGTGCACTTGACAAGCTTGTCATTAAGGTGGTTCCAATGGAAAACTTGAATGGCCGCAAAGTTGTTGAAGCTGGAGATCTCTGTGAGAGAAGAAATGGTAGAGGAGTTGATCTCAACCGGAATTGGAGTGTAGATTGGGGCAAAAAGGAGAAGGATTATGATCCATATGAGGAGAATCCTGGAATTGCTCCATTCAGTGAGCCTGAAAGTCAAATTATGCGGAAACTTGCCATATCTTTTGAACCGAATCTATGGGTCAACGTGCACTCTGGAATGGAGGCTCTTTTTATGCCTTATGATCATAAAAATACAACACCAGATGGATTGCCATTGCAACGGATGAAATCATTGCTTGAAGAAGTAAAACATCTTCATTGCCAAGAGCGCTGCATGATTGGGTCTGGAGGCGGTTCTGTAGGGTATTTTGCACACGGGACAGCAACTGATTTCATGTATGACATTGTGGGGGTACCCATGGCTTTCACCTTTGAGATATATGGTGATGGAACTGCCTCATCGAGAGATTGTTTCAAAATGTTCAATCCCACCGACCTTGCTACCTACAATAGAGTTCTGAGTGACTGGTCGGCAACATTCTTTACGATTTTCAAATTGGTGCCGCAGAAACTTGGTGATTCAAACGCGTCTATTTTGAAGCCGGATAAGTTGGTATCGATAGATGAGTATCTAGATGGGTATTTGATGGAAAGAAGAAATAGATATGGAAAGAAGTTGGAGGTGCTTGAGCTTGGAATGCAAGAAATAAGAACATATTTTAGGCTCTTTTTATTATCTTCAGTGTTATTACTGTTCATGTTCTGTTCTAGAATTTCAAAAAGCAAGTGTAGACCAATTGTTTCTGCTATACCCCTCTAA 1314 0.4117 MALSIFQFLLFSISNFFLASSFQDLLLLSVNAQSHNLTQPSVTPINFDLYHSSGNLMEEIRALVHRHPDKLTMETIKAGNKGYGAEVSVVTYCKEKKDNDERSKLRILLSFGQHGRELITTELALRILSILSEEKFLPSMDQASLNSALDKLVIKVVPMENLNGRKVVEAGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGIAPFSEPESQIMRKLAISFEPNLWVNVHSGMEALFMPYDHKNTTPDGLPLQRMKSLLEEVKHLHCQERCMIGSGGGSVGYFAHGTATDFMYDIVGVPMAFTFEIYGDGTASSRDCFKMFNPTDLATYNRVLSDWSATFFTIFKLVPQKLGDSNASILKPDKLVSIDEYLDGYLMERRNRYGKKLEVLELGMQEIRTYFRLFLLSSVLLLFMFCSRISKSKCRPIVSAIPL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0157 437 SMART zn_carb 50 336 IPR000834 GO:0004181|GO:0006508|GO:0008270
Gso4g0157 437 Pfam Zinc carboxypeptidase 60 330 IPR000834 GO:0004181|GO:0006508|GO:0008270
Gso4g0157 437 PANTHER PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B 20 435 - -
Gso4g0157 437 PANTHER OS02G0119300 PROTEIN 20 435 - -
Gso4g0157 437 CDD M14-CPA-like 104 326 IPR034269 -
Gso4g0157 437 Gene3D Zn peptidases 45 335 - -
Gso4g0157 437 SUPERFAMILY Zn-dependent exopeptidases 45 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0157 Gso-Chr4 1399259 1405122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0157 - - gmx:100805425 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0157 4 1399259 1405122 Gso4g0157 4 1399259 1405122 ECH