Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0149 ATGGGCGAGGTATCTGAAAGTACCATGACGAAGAGGAAGAAGAAGGGACGCCCCTCTCTTTTGGATCTTCAAAAGCGATCTCTCAAAAAAGAACAGCAAAATCACCACCAGCAGCGACACAATTCAACCAACGTTGTTCCCCACGACGACGACGAGGACGAGCGCAAGGAGAAGAAGCACAAGCTCTTGGTTGGTCTCAATTCCCATCTCCACCACCCAACATTATTGCCCAATTCCCAACCCTTCAATTCCGATCCCAAGAGGCGCAAGATTATTGACCCTCTCCAAACGGATGTGAAGGTTCCGAAAGCGACTGACAGTAAACAACATGGTTCGCAGGGAGAGTCCGGTCCCACTACGCCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGGCTTCAAAAAAAGGACACACATGGGGTGTTCTCTGAGCCAGTGGATCCAGAAGAGCTTCCTGATTATCTTGACATCATTAAACACCCGATGGATTTTGGAACTGTCAGGAAGAAATTGGATGGGGGGCTATATACTGACTTGGAACATTTTGAGAAAGACGTGTTCTTGATATGCTCTAATGCAATGCAATATAATTCCTCAGATACCATTTACCATCGACAGGCCCGAGCCATGCAAGAGATTGCAAGGAAAGACTTTGAGAATCTTAGACAAGATAGTGATGATGATAGTGAACCACAGCCCAAAATTGTGCAGAGAGGAAGGCCACCAGGCAAGCACTCAAGAAAGTCACTGGGACTGGGTATGCCTCCTCCTGAGCGTGTTGGTCCTGAATCTTCTTCTGATGCAACTCTGGCTTCTGGCGGGGATATTGCTAGTGGTTCCAACGGTTATAATCTAAGAAAAGTACCCAGCAAATTTCAGCCCACAGATTCATCTGCGAGGGCCTACAACAGCACTTTTAACAGTGGAGGGTATGTTGGCTGGTCTGAATGGGAGAATGAATTTCCAGCTTCTGTTGTAAAAGCTGTGCTAAGATATGGAAAGAAGCAGTTTGTGGTTGATGAAACCAGGCGTGATACTTACAAAAATCCAGTGACTTTAGGAAATGAACGACCGGTGTTGTCCACAGTTGAAGATGAATTCAAGCAACTTCTTGCAGTAGGTGTACACATGAAGCATAGCTATGCAAGAAGTCTAGCCCATTTTGCTGCAGACCTTGGTCCTGTTGTTTGGAAGATTGCTGCAAGTAAAATCAGCAGTGTTTTGCCAGCAGGACATGATTTTGGTCCTGGATGGGTAAGTGAAGATGATGGTTCGTCACAGAGGCGACACTTCCCAGTTTGTGATGAGGGTAGAACTTCAGACCCTCCTGTACCAGAGGATTATAGAAGTAGATTTTCTTCTCCATCTGGATCGCTCCCCCTTGCAAATAGACCATTCTATCAAAGTGGAGACATGGCTATAGATAATTACCAAAATGAGTTGAATCCAGTAATCAACATTCCTGGTGGGTCTGAATCCATAACTCCTATGAGGATTCAGCAGGAATCCATGGTGCACTCTGATGATTTTGGTTCATGTGATCGGTTAGGTTCTAATTTCCCATCTCAAATGAAGATGGTAAGACTTGCTGATCTAACTGGGACTTCGAGTGCTGGAGTTGTTCCTCAAATGTTTGACATGGATCCCATAAGCAACCGCATTGTGCATACAAATGTTGATTCTTCTTTTAAGGGTCAGCACTTAAGCAAATTAAGTCAATTAGATTCTGGTAATTTATTGTCACGGGAACCTGGATTTGAGCCACAAAGTTGGCCTCAAGGGCTTGCTGGAAAATCATCTTGGCAGGGATTGGAAGTTCCCACTAAACAGAATTCTTTTGCTCTTGCTAATGACTTAAATGGAAGGATTGGAACTACAAACTCACCCAGTTCCAACGTGGAGGCTGGTTCCCAGTTGCAGCCTAATTTGGCATTACAGCTCTGA 1950 0.4492 MGEVSESTMTKRKKKGRPSLLDLQKRSLKKEQQNHHQQRHNSTNVVPHDDDEDERKEKKHKLLVGLNSHLHHPTLLPNSQPFNSDPKRRKIIDPLQTDVKVPKATDSKQHGSQGESGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYLDIIKHPMDFGTVRKKLDGGLYTDLEHFEKDVFLICSNAMQYNSSDTIYHRQARAMQEIARKDFENLRQDSDDDSEPQPKIVQRGRPPGKHSRKSLGLGMPPPERVGPESSSDATLASGGDIASGSNGYNLRKVPSKFQPTDSSARAYNSTFNSGGYVGWSEWENEFPASVVKAVLRYGKKQFVVDETRRDTYKNPVTLGNERPVLSTVEDEFKQLLAVGVHMKHSYARSLAHFAADLGPVVWKIAASKISSVLPAGHDFGPGWVSEDDGSSQRRHFPVCDEGRTSDPPVPEDYRSRFSSPSGSLPLANRPFYQSGDMAIDNYQNELNPVINIPGGSESITPMRIQQESMVHSDDFGSCDRLGSNFPSQMKMVRLADLTGTSSAGVVPQMFDMDPISNRIVHTNVDSSFKGQHLSKLSQLDSGNLLSREPGFEPQSWPQGLAGKSSWQGLEVPTKQNSFALANDLNGRIGTTNSPSSNVEAGSQLQPNLALQL* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0149 649 MobiDBLite consensus disorder prediction 267 299 - -
Gso4g0149 649 SUPERFAMILY Bromodomain 108 228 IPR036427 GO:0005515
Gso4g0149 649 MobiDBLite consensus disorder prediction 422 458 - -
Gso4g0149 649 SMART bromo_6 117 225 IPR001487 GO:0005515
Gso4g0149 649 PRINTS Bromodomain signature 139 152 IPR001487 GO:0005515
Gso4g0149 649 PRINTS Bromodomain signature 153 169 IPR001487 GO:0005515
Gso4g0149 649 PRINTS Bromodomain signature 169 187 IPR001487 GO:0005515
Gso4g0149 649 PRINTS Bromodomain signature 187 206 IPR001487 GO:0005515
Gso4g0149 649 Pfam Bromodomain 131 210 IPR001487 GO:0005515
Gso4g0149 649 Gene3D - 122 239 IPR036427 GO:0005515
Gso4g0149 649 MobiDBLite consensus disorder prediction 1 64 - -
Gso4g0149 649 MobiDBLite consensus disorder prediction 1 123 - -
Gso4g0149 649 PANTHER BROMODOMAIN-CONTAINING PROTEIN-RELATED 8 437 - -
Gso4g0149 649 CDD Bromodomain 124 220 - -
Gso4g0149 649 MobiDBLite consensus disorder prediction 224 299 - -
Gso4g0149 649 ProSitePatterns Bromodomain signature. 141 198 IPR018359 -
Gso4g0149 649 PANTHER BROMODOMAIN CONTAINING PROTEIN 8 437 - -
Gso4g0149 649 MobiDBLite consensus disorder prediction 425 447 - -
Gso4g0149 649 ProSiteProfiles Bromodomain profile. 136 206 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0149 Gso-Chr4 1282012 1286647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0149 K22184 - gmx:100811115 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0149 4 1282012 1286647 Gso4g0149 4 1282012 1286647 ECH