Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0131 ATGAAAGGTGCCGTCCTCGTCGCCATTGCCGCTTCCATCGGCAATTTCCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCCATTGTTTACATTAAGAAAGACCTTGCGTTGCAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCCCTGATTGGAGCAACGGTAATCACCACATGCTCTGGTCCTATAGCGGATTGGCTCGGTCGGCGACCCATGATGATAATCTCATCTGTGCTCTATTTCTTGGGTGGTTTGGTGATGCTGTGGTCCCCAAATGTGTATGTGTTGTGCTTGGCGAGGCTACTTGATGGATTTGGGATTGGCCTTGCTGTGACTCTTGTCCCGGTCTATATATCTGAAACGGCGCCGTCTGAAATAAGGGGGTCGTTGAATACGCTTCCTCAGTTCAGTGGCTCTGGAGGAATGTTTTTGTCGTACTGTATGGTTTTTGGCATGTCATTGAGTCCCGCGCCTAGCTGGAGGCTCATGCTTGGGGTTCTGTCTATTCCTTCTCTCTTGTATTTTGCATTGACCATTTTTTTCTTGCCCGAGTCTCCTCGGTGGCTGGTCAGCAAAGGAAGGATGCTCGAGGCTAAGAAGGTGCTCCAAAGATTGCGCGGAAGGGAGGATGTGTCAGGCGAGATGGCATTGCTGGTTGAAGGTCTCGGGATTGGGGGTGATACATCTATCGAAGAGTACATAATTGGCCCTGCTGACGAGGTGGCTGATGGTCATGAACATGCAACAGAGAAAGATAAAATTCGATTATATGGATCCCAAGCAGGCCTTTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCGTCACGCCATGGAAGCATCATCAACCAAAGCATGCCCCTCATGGATCCTCTGGTGACACTGTTTGGTAGCATTCATGAGAAGCTCCCCGAGACAGGAGCAGGAGGAAGCATGCGAAGCACTCTGTTTCCAAATTTTGGAAGCATGTTCAGCACTGCTGAGCCGCATGCTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAGGACTACATGTCAGATGCAGCCGGTGGGGACTCTGATGATAATTTGCACAGTCCTTTAATCTCACGCCAAACAACAAGCCTTGAAAAAGACTTGCCTCCTCCTCCTTCCCATGGCAGTATCCTTGGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGGTCAGGTGAGCAAGGTGGTAGTACAGGTATTGGTGGTGGCTGGCAACTGGCATGGAAATGGACTGATAAAGGTGAGGATGGAAAACAACAAGGAGGGTTTAAAAGGATTTATTTACATGAGGAGGGAGTTTCTGCATCTCGTCGTGGATCCATTGTATCGATTCCCGGTGAAGGCGAATTTGTCCAGGCTGCTGCCTTGGTAAGCCAACCCGCTCTTTACTCCAAGGAGCTTATTGATGGACACCCAGTTGGGCCTGCAATGGTTCACCCATCTGAGACAGCTTCAAAGGGGCCAAGTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGGTTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTTGAAGAGGCCGGTGTTGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCGGCATCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCCTGTATAGGCGTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAGTTGCTACTTACTACAATCCCCGTGCTGATTGTGTCACTCATTATTTTGGTCATTGGAAGCCTGGTAAATTTTGGCAATGTCGCCCATGCAGCAATCTCAACAGTATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTATGGACCAATTCCAAACATCCTTTGCTCAGAGATTTTCCCCACTAGGGTGCGTGGCCTCTGCATTGCTATCTGTGCATTAGTGTTCTGGATTGGAGACATCATCATCACATACTCGCTGCCTGTGATGCTGGGCTCTTTAGGACTTGGTGGTGTATTCGCCATTTACGCAGTTGTTTGTTTCATCTCGTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGAGCAAAGCAGGCTGCTTCTGCCAAGAATGAGTGA 2214 0.4824 MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALQTTMEGLVVAMSLIGATVITTCSGPIADWLGRRPMMIISSVLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLSPAPSWRLMLGVLSIPSLLYFALTIFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYIIGPADEVADGHEHATEKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMPLMDPLVTLFGSIHEKLPETGAGGSMRSTLFPNFGSMFSTAEPHAKNEQWDEESLQREGEDYMSDAAGGDSDDNLHSPLISRQTTSLEKDLPPPPSHGSILGSMRRHSSLMQGSGEQGGSTGIGGGWQLAWKWTDKGEDGKQQGGFKRIYLHEEGVSASRRGSIVSIPGEGEFVQAAALVSQPALYSKELIDGHPVGPAMVHPSETASKGPSWKALLEPGVKHALVVGVGIQILQQFSGINGVLYYTPQILEEAGVEVLLSDIGIGSESASFLISAFTTFLMLPCIGVAMKLMDVSGRRQLLLTTIPVLIVSLIILVIGSLVNFGNVAHAAISTVCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLGSLGLGGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGAKQAASAKNE* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0131 737 PANTHER - 1 734 - -
Gso4g0131 737 MobiDBLite consensus disorder prediction 367 381 - -
Gso4g0131 737 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 1 734 - -
Gso4g0131 737 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 713 IPR020846 GO:0022857
Gso4g0131 737 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso4g0131 737 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0131 737 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0131 737 PRINTS Sugar transporter signature 526 536 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0131 737 PRINTS Sugar transporter signature 625 646 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0131 737 PRINTS Sugar transporter signature 648 660 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0131 737 CDD MFS_GLUT_like 514 711 - -
Gso4g0131 737 Gene3D MFS general substrate transporter like domains 496 735 IPR036259 -
Gso4g0131 737 SUPERFAMILY MFS general substrate transporter 5 718 IPR036259 -
Gso4g0131 737 MobiDBLite consensus disorder prediction 336 355 - -
Gso4g0131 737 ProSitePatterns Sugar transport proteins signature 2. 103 128 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso4g0131 737 MobiDBLite consensus disorder prediction 393 412 - -
Gso4g0131 737 CDD MFS_GLUT_like 10 191 - -
Gso4g0131 737 MobiDBLite consensus disorder prediction 332 417 - -
Gso4g0131 737 Gene3D MFS general substrate transporter like domains 2 257 IPR036259 -
Gso4g0131 737 Pfam Sugar (and other) transporter 7 218 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso4g0131 737 Pfam Sugar (and other) transporter 501 724 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0131 Gso-Chr4 1154174 1159358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0131 1 737 Organic Solute Cotransporters AT4G35300 71.180 0.0 990
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0131 - - gmx:100791976 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0131 4 1154174 1159358 Gso4g0131 4 1154174 1159358 ECH
Gso4g0131 4 1154174 1159358 Gso6g0119 6 1137172 1142478 GST