Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0122 ATGGCTGAGGGAAAAACAGCAACTCAAAAATCTCTTCAGGATTTTGATCCTCAAAAGACACCCAGAAGGAACAAGTATGCTTTCGCCTGTGCCATTTTGGCTTCCATGACTTCCATATTACTTGGCTATGATGTTGGGGTGATGAGTGGAGCGATTATATATATAAAGAGAGACTTGAAATTGACGGACGTGCAAATCGAGATCCTGGTAGGCATCATCAACCTTTACTCTCTGATAGGTTCATGCCTCGCCGGCAGAACCTCCGACTGGATCGGTCGGCGTTACACGATCGTCCTTGCCGGAAGCATCTTCTTCGCCGGAGCCATCCTGATGGGAATATCCCCGAACTATCCCTTTCTTATGTTCGCGCGCTTCATCGCCGGCGTCGGCATCGGTTATGCCCTCATGATCGCCCCCGTCTACACCACCGAAGTCTCCCCTCCTTCCTGTCGTGGCTTCCTCACCTCCTTCCCAGAGGTATTCATAAATGGAGGGATATTGCTAGGATACATATCAAACTACGGATTTTCAAAGCTGTCACTTGAGCTGGGATGGAGGATGATGCTGGGAGTTGGGGCGGTTCCTTCAGTGATCCTAGCGCTGGGAGTGTTAGCCATGCCAGAGTCGCCACGCTGGCTGGTGATGCGAGGTAGGCTCGGCGAAGCCACCAAAGTCCTCAACAAAACCTCCGACTCCAAAGAAGAGGCTCAGCAGAGGCTAGCCGACATCAAAGCTGCCGCTGGCATCCCCGAGAGTTGCACCGACGACGTCGTTCAAGTAACCAACCGAAACCACGGCGGCGGTGTATGGAAAGAGTTCTTCCTTTACCCTACACCGGCGGTGCGCCACATCCTCATAGCCGCTCTCGGGATTCATTTCTTTCAGCAGGCTTCCGGAATAGACGCCGTGGTTTTGTACAGCCCCGAGATTTTCAAGAAGGCTGGGCTGGAATCCGATGGGGAACAGCTTCTGGCAACCGTGGCCGTTGGATTCGCCAAAACCGTATTCATCTTAGTGGCTACGTTTTTGTTGGATCGGGTGGGGCGTCGGCCGCTGTTGTTGACAAGTGTTGGCGGAATGGTGTTTTCTCTTCTGACGCTGGGGTTGAGTCTCACCGTCATTGACCACTCACGCGCCGTCCTCAAGTGGGCCATTGGGTTGAGCATAGGCATGGTTTTGTCCTACGTGTCCACTTTCTCCGTTGGAGCGGGTCCCATCACGTGGGTTTATAGCTCCGAGATCTTCCCCTTAAGGCTTCGCGCGCAGGGTGCGGCTATGGGAGTTGTCGTGAATAGGGTCACTAGTGGGGTCATCTCAATGACTTTCCTGTCCCTCTCTAATAAGATCACTATTGGTGGGGCATTCTTCCTCTTTGGGGGAATCGCAATGTGTGGATGGATCTTCTTCTATACCATGCTCCCCGAAACACAGGGCAAGACCCTTGAGGAAATGGAAGGCTCCTTTGGTAAATTCGCCTCATGGTCCAAGGGTAAGGACGGTGATAACGGAGAGATCCAATTAGCCAATTAG 1530 0.5255 MAEGKTATQKSLQDFDPQKTPRRNKYAFACAILASMTSILLGYDVGVMSGAIIYIKRDLKLTDVQIEILVGIINLYSLIGSCLAGRTSDWIGRRYTIVLAGSIFFAGAILMGISPNYPFLMFARFIAGVGIGYALMIAPVYTTEVSPPSCRGFLTSFPEVFINGGILLGYISNYGFSKLSLELGWRMMLGVGAVPSVILALGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQQRLADIKAAAGIPESCTDDVVQVTNRNHGGGVWKEFFLYPTPAVRHILIAALGIHFFQQASGIDAVVLYSPEIFKKAGLESDGEQLLATVAVGFAKTVFILVATFLLDRVGRRPLLLTSVGGMVFSLLTLGLSLTVIDHSRAVLKWAIGLSIGMVLSYVSTFSVGAGPITWVYSSEIFPLRLRAQGAAMGVVVNRVTSGVISMTFLSLSNKITIGGAFFLFGGIAMCGWIFFYTMLPETQGKTLEEMEGSFGKFASWSKGKDGDNGEIQLAN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0122 509 ProSitePatterns Sugar transport proteins signature 2. 126 151 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso4g0122 509 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0122 509 PRINTS Sugar transporter signature 121 140 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0122 509 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0122 509 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0122 509 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0122 509 ProSitePatterns Sugar transport proteins signature 1. 84 101 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso4g0122 509 Coils Coil 226 246 - -
Gso4g0122 509 PANTHER SUGAR TRANSPORTER 14 505 - -
Gso4g0122 509 Gene3D MFS general substrate transporter like domains 20 491 IPR036259 -
Gso4g0122 509 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 505 IPR045262 GO:0015144
Gso4g0122 509 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0122 509 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 477 IPR020846 GO:0022857
Gso4g0122 509 SUPERFAMILY MFS general substrate transporter 16 485 IPR036259 -
Gso4g0122 509 CDD MFS_PLT 33 484 IPR044776 GO:0005351
Gso4g0122 509 Pfam Sugar (and other) transporter 30 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0122 Gso-Chr4 1070752 1073281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0122 17 509 Organic Solute Cotransporters AT3G18830 72.984 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0122 - - gmx:102670364 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0122 4 1070752 1073281 Gso4g0122 4 1070752 1073281 ECH