Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0112 ATGGCTAATACACCTTCGAATTCTTCAATTCTCCTCTCCCTTTTTCTATTGGCCATCGCCCTCTCCCTCGCTGAGTCCCAATCTTTCATCGGAGTAAACTACGGCCAGGTCGCCGACAACCTTCCGGCGCCGGAGGACACGGCCAGCCTCCTCAAATCCACCACCATCGGAAAAGTCCGTCTCTACGGCGCCGATCCCGCCATCATCAAGGCCCTCGCCAACTCCGGCATCGGAATCGTCATCGGCGCCTCCAACGGCGACATTGCGAGTCTCGCCGGCGATCCCAACGCGGCCACCCAGTGGGTTAACGCGAACGTCTTGCCCTACTACCCGGCGAGCAACATCACTCTGATCACCGTCGGAAACGAGATTTTGACCTTAGCCGACCAGGGTCTTAAGTCGCAGCTCGTCCCGGCGATGCGAAATGTCCAAAATGCCCTCGGCGCGGCCTCGCTCGGCGGCAAGATCAAGGTCTCCACAGTGCACTCGATGGCCGTGTTGACTCAGTCGGACCCGCCCTCGTCCGGGTTGTTCAACCCGGCGCTGCAAGACACGCTCAAACAGCTGCTGGCGCTACTCAAGGACAACAAATCGCCGTTCACGATCAACCCGTACCCGTTTTTCGCTTACCAGAGCGACCCGAGACCTGAAACGCTGGCGTTTTGCCTCTTCCAGCCCAACTCGGGCCGGGTCGACTCGGGCAACGGGAAGCTTTACACCAACATGTTCGATGCTCAGGTTGATGCTGTACATTCTGCTTTGAGTGCCATGGGATTCCAGGACGTGGAGATTGTGGTTGCTGAGACTGGATGGCCCTCACGTGGTGACAGCAACGAATTGGGACCCAGTGTTGAAAATGCAAAGGCCTATAACGGGAACCTGATTTCTCATCTTAGATCATTGGTTGGGACACCTTTGATGCCTGGGAAGTCTGTGGACACTTACATTTTTGCACTCTATGATGAGGATCTCAAACAAGGCCCAGGATCTGAGCGTGCATTTGGTATGTTCAAAACTGATCGCACCGTGTCGTACGACGTTGGATTAACCAAGTCTAGCCAGCAGACTCCATCAACTAGTCCAACAACTCCAGCACCTAAAACTGCTGGATGGTGTATACCCAAAGCTGGAGTTTCTGATGCTCAGTTGCAGGCCAATATTGACTACGCCTGTAGCCAAGGTATAGATTGCGGGCCAATTCAACCAGGAGGCGCTTGTTTTGAGCCTAACACAGTAGCATCCCATGCTGCATATTCCATGAATCTATACTACCAAACTTCTGGCAAAAATCAATGGAACTGTGATTTCTCTCAATCAGCAACACTCACATCCCAAAATCCAAGTTACAATGCTTGCATTTACACTGGTGGGAGCACCTGA 1380 0.5341 MANTPSNSSILLSLFLLAIALSLAESQSFIGVNYGQVADNLPAPEDTASLLKSTTIGKVRLYGADPAIIKALANSGIGIVIGASNGDIASLAGDPNAATQWVNANVLPYYPASNITLITVGNEILTLADQGLKSQLVPAMRNVQNALGAASLGGKIKVSTVHSMAVLTQSDPPSSGLFNPALQDTLKQLLALLKDNKSPFTINPYPFFAYQSDPRPETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSAMGFQDVEIVVAETGWPSRGDSNELGPSVENAKAYNGNLISHLRSLVGTPLMPGKSVDTYIFALYDEDLKQGPGSERAFGMFKTDRTVSYDVGLTKSSQQTPSTSPTTPAPKTAGWCIPKAGVSDAQLQANIDYACSQGIDCGPIQPGGACFEPNTVASHAAYSMNLYYQTSGKNQWNCDFSQSATLTSQNPSYNACIYTGGST* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0112 459 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Gso4g0112 459 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 451 IPR044965 GO:0004553|GO:0005975
Gso4g0112 459 Pfam Glycosyl hydrolases family 17 30 347 IPR000490 GO:0004553|GO:0005975
Gso4g0112 459 Gene3D Glycosidases 29 356 - -
Gso4g0112 459 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 10 451 - -
Gso4g0112 459 SMART X8_cls 370 454 IPR012946 -
Gso4g0112 459 Gene3D - 367 455 - -
Gso4g0112 459 SUPERFAMILY (Trans)glycosidases 30 347 IPR017853 -
Gso4g0112 459 Pfam X8 domain 371 441 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0112 Gso-Chr4 991304 996048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0112 24 454 Miscellaneous Gene Families AT2G16230 65.661 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0112 - - gmx:100810568 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0112 4 991304 996048 Gso4g0112 4 991304 996048 ECH