Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0072 ATGGCCTCTGCTTCTGCTACTCTTCTCAAGTCATCTCCTGTTCTTGACAAGTGCGAGTGGGTCAAAGGCCAGACCCTTCGCCAACTTCTCGTGAGATGCAACCCTTCCTCAGCATCAGCTCTCACCATCAAAGCTGCTTCCTATGCTGACGAGCTCGTCAAAACCGCCAAAACAGTGGCCTCACCGGGGCGTGGTATTTTGGCGATGGATGAGTCAAATGCAACCTGCGGGAAGCGTTTGGCATCTATTGGGTTAGAGAACACAGAAGCTAATCGGCAGGCATACCGTACCCTACTTGTGACAGTACCTGGTCTTGGTGAATACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACTGTCGATGGAAGGAAGATCGTCGACGTACTTGTTGACCAAAACATTGTTCCCGGTATCAAGGTCGACAAGGGTTTGGTGCCCCTAGCTGGTTCGAACGATGAGTCATGGTGCCAAGGTCTTGATGGTCTTGCGTCTCGCTCAGCTGCATACTACCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTGGCAGTGAAGGAAGCTGCCTGGGGTCTAGCTCGCTATGCTGCAATTTCACAGGAGAACGGGTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAGCATGGGATTGACAGGACATTCGAAGTAGCCCAAAAGGTGTGGTCAGAGGTATTCTTGTACCTGGCTGAGAACAATGTCCTGTTGGAAGGTATTCTCCTCAAGCCTAGCATGGTTACTCCAGGAGCCGAGTCCAAGGACAAGGCCACTCCTCAGCAAGTTGCTGATTACACCCTCAAGCTCCTTCACAGGAGAATCCCACCTGCTGTCCCTGGAATCATGTTTCTGTCTGGCGGACAATCTGAGGTTGAAGCAACCTTGAACTTGAATGCTATGAACCAGTCTCCAAACCCATGGCACGTGTCCTTCTCCTACGCCAGAGCTCTCCAAAACACCTGCTTGAAGACATGGGGTGGACTCCCTGAGAACGTGAAGGCTGCTCAAGATGCACTCCTTTTCCGTGCCAAGTCCAACTCACTCGCTCAGCTTGGAAAGTACACTGCCGAGGGTGAATCTGAGGAAGCCACTCGGGGAATGTTCGTCAAAGGTTACTCCTACTAA 1188 0.5185 MASASATLLKSSPVLDKCEWVKGQTLRQLLVRCNPSSASALTIKAASYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTVPGLGEYISGAILFEETLYQSTVDGRKIVDVLVDQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQENGLVPIVEPEILLDGEHGIDRTFEVAQKVWSEVFLYLAENNVLLEGILLKPSMVTPGAESKDKATPQQVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGLPENVKAAQDALLFRAKSNSLAQLGKYTAEGESEEATRGMFVKGYSY* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0072 395 CDD FBP_aldolase_I_a 49 375 - -
Gso4g0072 395 Gene3D Aldolase class I 30 394 IPR013785 -
Gso4g0072 395 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 38 395 IPR000741 GO:0004332|GO:0006096
Gso4g0072 395 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 256 266 IPR029768 -
Gso4g0072 395 SUPERFAMILY Aldolase 43 395 - -
Gso4g0072 395 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 38 395 - -
Gso4g0072 395 Pfam Fructose-bisphosphate aldolase class-I 51 395 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0072 Gso-Chr4 638736 640832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0072 39 395 Miscellaneous Gene Families AT3G52930 54.848 5.62e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0072 K01623 - gmx:100798677 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0072 4 638736 640832 Gso4g0072 4 638736 640832 ECH