Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0069 ATGTTTTTTAACGGATATGGGTATCAAGGGACATCATCATTTGAGCAGACATTTCGATGTTACTCTGCTTCGTTTATTGAAAAGCCCGAAATTGAAAATGGTGATAAAATTATAATGCCTCCTTCAGTCCTTGACCGTCTAGCATTTCTACGTATGGATTATCCAATGATGTTTGAACTCAGAAATGGTGCTTCTGAGAGGGTTTCTCATTGTGGGGTTCTGGAGTTCATTGCAGATGAAGGAACTATATATATGCCATACTGGATGATGCAGAATCTGCTTTTGCAAGAGGGAGACATCGTAAGAGTGAAATTCGTATCACTTCCAAAGGGAACATATGTTAAATTACAGCCACACACAAAGGACTTTTTTGATATTTCCAATCCAAAAGCTATCTTAGAGACCACTTTGAGAAAATTTTCCTGCTTGACTACTGGAGATACTATCATGATGACATACAACAACAAAAAATATTACTTGGATGTTATAGAAACAAAGCCTGCTAATGCTATAAGCATCATCGAGACAGACTGCGAGGTGGACTTTGCTCCTTCCTTGGATTACAAGGTTACTACTGCAAGCAAAACACTAGACAAAGGCAAGTTCAATCCATTTTTTGGGACTGGTAGACGTTTGGATGGAATCTCAATTCCTCCTGTTTATTCTTCACGGCCTTCCGATGTTCCAAATGTCAATTCATTGTCTTCTACAACATCTAGTTCACCAAATTTCGCTCGTCCATCTCAGGGAAAGCTAGTGTTTGCATCGAATTTTTACCGCACAAAAGAAATAGGAAAGGAAAAGAATGAGTCAAAACAAGAGCCACCCCATCAGAAGCAACCGAAATTTCAGCCTTTCATTGGGAACAAGTATTCCCTAAGGGGTTGA 888 0.3919 MFFNGYGYQGTSSFEQTFRCYSASFIEKPEIENGDKIIMPPSVLDRLAFLRMDYPMMFELRNGASERVSHCGVLEFIADEGTIYMPYWMMQNLLLQEGDIVRVKFVSLPKGTYVKLQPHTKDFFDISNPKAILETTLRKFSCLTTGDTIMMTYNNKKYYLDVIETKPANAISIIETDCEVDFAPSLDYKVTTASKTLDKGKFNPFFGTGRRLDGISIPPVYSSRPSDVPNVNSLSSTTSSSPNFARPSQGKLVFASNFYRTKEIGKEKNESKQEPPHQKQPKFQPFIGNKYSLRG* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0069 295 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 1 295 IPR004854 GO:0006511
Gso4g0069 295 Pfam Ubiquitin fusion degradation protein UFD1 14 184 IPR004854 GO:0006511
Gso4g0069 295 Gene3D - 110 183 - -
Gso4g0069 295 Gene3D - 4 108 IPR042299 -
Gso4g0069 295 MobiDBLite consensus disorder prediction 264 295 - -
Gso4g0069 295 MobiDBLite consensus disorder prediction 226 247 - -
Gso4g0069 295 MobiDBLite consensus disorder prediction 226 248 - -
Gso4g0069 295 PANTHER UBIQUITIN FUSION DEGRADATION PROTEIN 1 HOMOLOG 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0069 Gso-Chr4 613757 617382 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0069 K14016 - gmx:100795133 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0069 4 613757 617382 Gso4g0069 4 613757 617382 ECH