Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0030 ATGGCGATTGAAGCACAGTTGTATCCCAACAATGCTCCTCCGTTTCCTTTTCACGTGTCAAGGGTAGACAAATCTCCAGCAGCATATAGTCATAGTCATAGGCAACAACAACCAGGTGGCTGGCAGATGAATCAGAACATTCCTCTTGTTCCTCCCAACTTTTCTTGTTTTTCCAATTCCAATTCCAATTCCAATTCCAATGTCCTCCAAAACGCCTTCAATAAGAATGTTGTTCAGCCTTCAGCCTCATATCCTCAATGCTTGGCTATTGAGTTTGATCAACAGAGGGAGATTGATCACCATATCAGATCACATAACGAAAAATTGAGGATTTTGTTGCAAGAGCAAAGGAAACAGCATGTGGCAGAGTTATTGAAGAAGGTGGAATCGAATGCTCTTCATTTGTTGAGACAGAAAGATGAAGAAATAGCGCAGGCAACAAAGAAAAGCACCGAGTTGAAAGAATTTATGACAAGGTTGGAGGTGGAGAACCAATCATGGCGTAAGGTAGCCGAGGAAAACGAGGCTATGGTATTGTCCCTTCACAACACCTTAGAAGATATGAAAGAAAGAGCTCTGTATCGGGTGACAAAAGAGGATGCAGAGTCGTGTTGCGATGAAAACATGAGAAACAGGGCAATGGAAGAAGGAACAGGAGAAAACAGACTGTGCGGTGGTGGTGGCGCTGGTGGGGTAGAAGAGGTTGAGCAAATTAGGAAAAGGACAATGGATTGCAAATGTTGTAATTCTCAAAATTCGTGCTTTATGTTTCTTCCTTGCAGACACCTCTGTTCGTGTAAAACTTGTGAGCCTTTTCTGCAAGTTTGCCCTGTTTGTAGTATGCCTAAAAAGTCTAGCATAGAGACATTAATTGTATAG 879 0.4232 MAIEAQLYPNNAPPFPFHVSRVDKSPAAYSHSHRQQQPGGWQMNQNIPLVPPNFSCFSNSNSNSNSNVLQNAFNKNVVQPSASYPQCLAIEFDQQREIDHHIRSHNEKLRILLQEQRKQHVAELLKKVESNALHLLRQKDEEIAQATKKSTELKEFMTRLEVENQSWRKVAEENEAMVLSLHNTLEDMKERALYRVTKEDAESCCDENMRNRAMEEGTGENRLCGGGGAGGVEEVEQIRKRTMDCKCCNSQNSCFMFLPCRHLCSCKTCEPFLQVCPVCSMPKKSSIETLIV* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0030 292 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 290 IPR013083 -
Gso4g0030 292 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 291 - -
Gso4g0030 292 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 291 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0030 Gso-Chr4 301459 303007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0030 K19042 - gmx:100776899 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0030 4 301459 303007 Gso4g0030 4 301459 303007 ECH
Gso4g0030 4 301459 303007 Gso6g0032 6 315498 317107 GST