Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0002 ATGAGTGGAGCTGTTCTTGTTGCTGTTGCTGCTGCCATCGGTAACTTACTACAAGGATGGGATAATGCGACTATTGCAGGATCTATCTTGTACATAAAAAGGGAGTTTCAATTACAAAGTGAACCCACAGTTGAAGGTCTAATTGTGGCTATGTCACTTATTGGAGCCACCGTGGTTACTACATGCTCTGGTGCCCTATCAGACTTGCTTGGCCGACGTCCAATGTTGATTATCTCCTCTATGCTTTATTTTGTTAGTTCTCTTGTCATGCTATGGTCTCCAAATGTTTATATCCTCCTCTTTGCTAGACTTTTAGATGGTCTGGGAATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGACAGCTCCTTCTGAGATTAGGGGATTACTCAATACACTTCCACAGTTCACTGGTTCTGCGGGAATGTTTTTCTCCTACTGTATGGTGTTTGGGATGTCACTGATGAAGGCGCCAAGCTGGAGAATCATGTTGGGTGTTCTTTCAATCCCTTCTCTTATTTACTTTGCACTCACACTGTTGTTCTTGCCTGAGTCTCCCAGATGGCTCGTCAGTAAGGGCCGAATGCTTGAGGCCAAGAAGGTTTTGCAGCGCCTTCGTGGAAGGGAAGATGTTTCCGGTGAAATGGCTTTACTGGTTGAGGGTCTTGGAGTTGGGGGTGATACAGCCATAGAAGACTATATAATTGGTCCAGCCAATGAACTTGCTGATGAAGAGGATCCGTCCAGAGAAAAAGATCAAATTAAGTTGTATGGACCAGAACAAGGCCAGTCCTGGGTTGCTAGACCTGTTGCTGGACCAAATTCTGTTGGCCTTGTATCTAGGAAAGGAAGCATGGCAAATCCAAGCAGTCTAGTGGACCCTCTAGTGACCCTCTTTGGTAGTGTACATGAGAAGCTCCCAGAAACAGGAAGCACCCTTTTTCCACACTTTGGGAGTATGTTCAGTGTTGGGGGAAATCAGCCAAGGAATGAAGATTGGGATGAGGAAAGCCTAGCCAGAGAGGGTGATGATTATGTCTCTGATGCTGGTGATTCTGATGACAATTTGCAGAGTCCATTGATCTCACGTCAAACAACGAGTCTGGATAAGGACATACCTCCTCATGCCCATAGTAACCTTGCAAGCATGAGGCAAGGTAGTCTTTTACATGGAAATTCAGGAGAACCCACTGGTAGTACTGGGATTGGTGGTGGTTGGCAGCTAGCATGGAAATGGTCTGAAAGAGAGGGCCCAGATGGAAAGAAGGAAGGTGGCTTCAAGAGAATATATTTACACCAAGATGGTGGTTCTGGATCTAGACGTGGGTCTGTGGTTTCACTCCCTGGCGGTGATTTACCAACTGACAGTGAGGTTGTACAGGCTGCTGCTCTGGTGAGTCAGCCTGCCCTTTATAATGAGGACCTTATGCGTCAACGGCCAGTTGGACCAGCTATGATTCATCCGTCTGAAACAATTGCAAAAGGGCCAAGTTGGAGTGATCTTTTTGAACCTGGGGTGAAGCATGCATTGATTGTGGGGGTGGGAATGCAAATTCTTCAGCAGTTCTCTGGTATAAATGGGGTCCTCTACTATACACCTCAAATTCTTGAGCAGGCAGGTGTTGGTTATCTTCTTTCAAGCCTAGGCCTTGGTTCTACTTCTTCATCCTTTCTTATTAGTGCGGTGACAACCTTGTTGATGCTTCCTTGTATAGCCATTGCCATGAGGCTCATGGATATTTCAGGCAGAAGGACTTTGCTGCTCAGTACAATCCCCGTCCTAATAGCAGCTCTTCTCATATTAGTCCTGGGAAGTCTTGTGGATTTGGGATCCACTGCAAATGCATCAATCTCAACCATTAGTGTTATTGTCTATTTCTGTTTCTTTGTCATGGGATTTGGACCAATTCCTAATATACTTTGTGCAGAGATCTTCCCCACTCGAGTTCGTGGTCTCTGCATTGCTATTTGTGCCCTTACCTTTTGGATCTGTGATATCATTGTCACCTACACACTCCCAGTTATGCTCAATTCTGTAGGCCTCGCTGGTGTTTTTGGTATTTATGCTGTCGTGTGCTTCATAGCATGGGTGTTTGTCTTTTTGAAAGTTCCAGAAACCAAGGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTCGGAGCAAAACAGTTTGACGATGCCAAGCACAACTGA 2205 0.4549 MSGAVLVAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSGALSDLLGRRPMLIISSMLYFVSSLVMLWSPNVYILLFARLLDGLGIGLAVTLVPLYISETAPSEIRGLLNTLPQFTGSAGMFFSYCMVFGMSLMKAPSWRIMLGVLSIPSLIYFALTLLFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGVGGDTAIEDYIIGPANELADEEDPSREKDQIKLYGPEQGQSWVARPVAGPNSVGLVSRKGSMANPSSLVDPLVTLFGSVHEKLPETGSTLFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYVSDAGDSDDNLQSPLISRQTTSLDKDIPPHAHSNLASMRQGSLLHGNSGEPTGSTGIGGGWQLAWKWSEREGPDGKKEGGFKRIYLHQDGGSGSRRGSVVSLPGGDLPTDSEVVQAAALVSQPALYNEDLMRQRPVGPAMIHPSETIAKGPSWSDLFEPGVKHALIVGVGMQILQQFSGINGVLYYTPQILEQAGVGYLLSSLGLGSTSSSFLISAVTTLLMLPCIAIAMRLMDISGRRTLLLSTIPVLIAALLILVLGSLVDLGSTANASISTISVIVYFCFFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYTLPVMLNSVGLAGVFGIYAVVCFIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQFDDAKHN* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0002 734 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 710 IPR020846 GO:0022857
Gso4g0002 734 SUPERFAMILY MFS general substrate transporter 6 715 IPR036259 -
Gso4g0002 734 MobiDBLite consensus disorder prediction 332 349 - -
Gso4g0002 734 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 1 727 - -
Gso4g0002 734 Pfam Sugar (and other) transporter 498 718 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso4g0002 734 Pfam Sugar (and other) transporter 7 220 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso4g0002 734 Gene3D MFS general substrate transporter like domains 2 256 IPR036259 -
Gso4g0002 734 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso4g0002 734 CDD MFS_GLUT_like 511 708 - -
Gso4g0002 734 Gene3D MFS general substrate transporter like domains 496 731 IPR036259 -
Gso4g0002 734 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0002 734 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0002 734 PRINTS Sugar transporter signature 523 533 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0002 734 PRINTS Sugar transporter signature 622 643 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0002 734 PRINTS Sugar transporter signature 645 657 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso4g0002 734 CDD MFS_GLUT_like 13 193 - -
Gso4g0002 734 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso4g0002 734 PANTHER - 1 727 - -
Gso4g0002 734 MobiDBLite consensus disorder prediction 327 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0002 Gso-Chr4 34839 47506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0002 1 734 Organic Solute Cotransporters AT4G35300 72.432 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0002 - - gmx:100793265 1377.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0002 4 34839 47506 Gso4g0002 4 34839 47506 ECH
Gso4g0002 4 34839 47506 Gso6g0002 6 20804 26974 GST