Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2184 ATGTCGGACTCGGCCAACAAGTTGCGATTGGTGCGTTGCCCAAAGTGTCAAAATCTTCTTCCCGAACTCGCTGATTACTCTGTCTATCAATGTGGTGGCTGTGGTGCCGTTCTTCGAGCGAAGCATAAAGGTTATGTGAGTGGTAGCTTGTCGGATGAGGGGAAGGTTGGACTTGGAGGAGATTCTGGTAAATCAGAAAGTTCTTTGGAGAAAGGCTTAGTTGATCGCAGTGACGCTTCAGATGTTGATGCTAAGTCCAGTAGTGTTCCCTCTAGGGATGATAATCAAAGGGCTGTGGATAAAGTAGATAACATGGACGAGGGGTTTCAGAACCAACCAGAGGATGCTGGTGAGAAAGGGGTAATTGATGATGATGTTGATGTCGGCAGGAATAAAGATGAACTGGGTAAAACAATAGGAAGAGAACAGGAGGAACCTCCCAAGTCTCAAATTGGTCGTGAGAATGGGTCCAAATTCTCTAATTGGCCGAATGGAGAGAGAAGTGAGATGGAAGGGTTTTGGAGAAAGCCACGAGCTGATATGGAAAATGTGAGATTTTCCACTTCGAAGTATCCTGACGAGGGACCTTCAAATGGCTTTTCTAGTAATTATATGGAATCGTGGAGGAGTCGTAAAGAATCAGATGGTCCAAACATGGTTCAGCACCTTGAGCAGGATCGAGCTGAGCTTCTAAGGAAGCTGGATGAGTTAAAGGTTCACATCAGTAAGTCTTCTGAAATGGTTCACAACCCCAAAGGAAAGATTCTTCCCGAAGAAAGGATGATTCCTCCGGATCCTCATCCTTATGGTGGTGGCTCTGATCCTTGGTTTTCAGATGGATCATCAGGGTTGAACAGAACTTCAAGGCAATTTTTTGGCACTGATAAGCATGTGGCAGGTTCCAATCATTTCAATTATCATCATGATCCATATTCTTATGCAAGTGGTCATGACATGGCTATGCCCAACTTCCCTCTTTCAATGCATAATCCAAATCGATACGGGGATCCTCTTGCATCCCAAATGCCGAGGAGAGGTCCACACCAGTTCCCACAACAGCCTTTGCATCCCTACTATCCTGGACGGTATGTTGATACTAATCCAGATTCATATGAACTATACTCGCATAATGCAATGCTTCACCCACCTACTTGCTCTTGTTTCCATTGCTATGATAGCAAACAAAGAGGTTCAGTGCCAGCACTGCCTGCTTCATTCATTAACAGCAGATTCCCCGATACCCCAAATGATCCTATGTTATACCATCATGAGATCCCAGGGGCATTTGGTCCACATGTTCATAATTCTAGAACTACCATTCCTCCTGTGACTTATCGTCAAAAACAATTACATGCAAGATGGGCTAGTGACTTCAACTCTGAGATGAGTGGTTTTGTTCGAAGCCGTCCTCGCAAAGTAATGTTAGCTAGCAGTAGCCAGCGTTGCTATCCTGCAGCTGGTGGTTCGCCCTTCATCTCATGTCATAATTGCTTTGAGTTGCTGCTACTGCCTAAAAAAGCATTGGTTCTGGTGAAAAATCACCAGCAAAAGGTGCAATGTGGGGCTTGTTCTTCAGAAATCAGCTTTGCTGTCATCAATAAGAAGCTGGTTATTTCTCCTAATTTAGAAACAAAGGGAGTTCCCTCAAGAGGTGATAATAGCTCTAATGAGGTTGTGAGTAGCCGTATGTCACATTCCCGAGGTCACGTGAGCAGGACTGGTGCTAACTTTTCATCTGATGATTATTCTGGTTATGATTTTCATTCAGTAGACAGAGAACCTATTTCTCTGGTTGCTTTGAACTCTAACAAGTCCCGGGAGATGCCGAGTTTTCATTCTTCATCTCTCAGTACCTCTGAAGATGAAAATAGTCCGGAAGCAATGATTGCTCCAAGGGAGGCCACTAAGTCCATTCAACGGCCAACTACAGACTCTCTATCTCCTCCTGCTGGCTCCCCTCTGCAGGAGTATTTTGATTACTCTAGTAATAACCATGCAGTAAATCGGTTTGGAAAGGGAAACCAAAGTAGTCGCTCAGAGCAGGAGAAGACAAAAGTGGACAAGATGTCAGCACGTCAAAATTCTTTGAAAGAGACAGCACTTGCAACAGAGATGGATGTCCATGATTATTCTAACACTGGGGTTTCCCAGGATTCTGGAGATGCTAGCCGAGAACATGATCATCCTAGATCCAACAGAGGTGGTGAATCATTTTTTGCAAACATTATCAAGAAAAGCTTCCGAGATTTCTCCCGGTCTAATCATACAGATGAGCGTAGCAAAATCAGTGTTACTGTAAATGGGCAGCCCTTATCAGATCGTGTTGTCAAGAAGGCTGAAAAGCTAGCCGGAACAATTCAGCCTGGAAATTATTGGTATGATTTTCGGGCTGGATTTTGGGGTGTCATGGGAGGGCCTTGTCTTGGAATAATTCCTCCATTTATAGAAGAGTTCAATCATCCCCTCCCAGACAAATGTTCTGGTGGGAGTACTGGTGTTTTAGTAAATGGTAGGGAACTTCACCAAAAAGACTTAGATTTGCTATCTGGGAGAGGACTCCCCACAGATATAGATAGATCTTATATCATTGAAATTTCTGGGAGAGTCCTGGATGAAGACACAGGTGAAGAGCTGGACAGCCTAGGCAAACTTGCACCAACGGTGGAGAAAGTAAAGCATGGATTTGGCATGAAAGCACCTAGAGCAGCTACATAA 2715 0.4427 MSDSANKLRLVRCPKCQNLLPELADYSVYQCGGCGAVLRAKHKGYVSGSLSDEGKVGLGGDSGKSESSLEKGLVDRSDASDVDAKSSSVPSRDDNQRAVDKVDNMDEGFQNQPEDAGEKGVIDDDVDVGRNKDELGKTIGREQEEPPKSQIGRENGSKFSNWPNGERSEMEGFWRKPRADMENVRFSTSKYPDEGPSNGFSSNYMESWRSRKESDGPNMVQHLEQDRAELLRKLDELKVHISKSSEMVHNPKGKILPEERMIPPDPHPYGGGSDPWFSDGSSGLNRTSRQFFGTDKHVAGSNHFNYHHDPYSYASGHDMAMPNFPLSMHNPNRYGDPLASQMPRRGPHQFPQQPLHPYYPGRYVDTNPDSYELYSHNAMLHPPTCSCFHCYDSKQRGSVPALPASFINSRFPDTPNDPMLYHHEIPGAFGPHVHNSRTTIPPVTYRQKQLHARWASDFNSEMSGFVRSRPRKVMLASSSQRCYPAAGGSPFISCHNCFELLLLPKKALVLVKNHQQKVQCGACSSEISFAVINKKLVISPNLETKGVPSRGDNSSNEVVSSRMSHSRGHVSRTGANFSSDDYSGYDFHSVDREPISLVALNSNKSREMPSFHSSSLSTSEDENSPEAMIAPREATKSIQRPTTDSLSPPAGSPLQEYFDYSSNNHAVNRFGKGNQSSRSEQEKTKVDKMSARQNSLKETALATEMDVHDYSNTGVSQDSGDASREHDHPRSNRGGESFFANIIKKSFRDFSRSNHTDERSKISVTVNGQPLSDRVVKKAEKLAGTIQPGNYWYDFRAGFWGVMGGPCLGIIPPFIEEFNHPLPDKCSGGSTGVLVNGRELHQKDLDLLSGRGLPTDIDRSYIIEISGRVLDEDTGEELDSLGKLAPTVEKVKHGFGMKAPRAAT* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2184 904 MobiDBLite consensus disorder prediction 542 575 - -
Gso3g2184 904 MobiDBLite consensus disorder prediction 636 675 - -
Gso3g2184 904 MobiDBLite consensus disorder prediction 606 624 - -
Gso3g2184 904 MobiDBLite consensus disorder prediction 117 151 - -
Gso3g2184 904 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 902 - -
Gso3g2184 904 MobiDBLite consensus disorder prediction 546 575 - -
Gso3g2184 904 MobiDBLite consensus disorder prediction 676 692 - -
Gso3g2184 904 Pfam Probable zinc-ribbon domain 486 531 IPR021480 -
Gso3g2184 904 MobiDBLite consensus disorder prediction 49 168 - -
Gso3g2184 904 Coils Coil 220 240 - -
Gso3g2184 904 MobiDBLite consensus disorder prediction 606 736 - -
Gso3g2184 904 MobiDBLite consensus disorder prediction 68 108 - -
Gso3g2184 904 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 902 IPR040244 GO:1900150
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2184 Gso-Chr3 47036634 47041816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2184 - - gmx:100814647 1837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g2184 3 47036634 47041816 Gso7g0512 7 5168966 5173896 PCT
Gso3g2184 3 47036634 47041816 Gso16g0220 16 2568474 2573609 PCT
Gso7g0512 7 5168966 5173896 Gso3g2184 3 47036634 47041816 PCT
Gso16g0220 16 2568474 2573609 Gso3g2184 3 47036634 47041816 PCT