Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1958 ATGTCGTCTCTGATAGCAGAAGATGTGAAGAGCAGATCAGAGGTGTACCACGGGGACGAAATGTGCCAAGTGAAGTCCAAGGAGCTTCTCAAGGAAATCGCCCTCCCCAACGGCCTTCTTCCCCTCAAGGACATGGAGGAGTGCGGCTACGACAGACAAACCGGCTTCGTCTGGCTCAAACAAAAGAAGAGTTACACCCACAAGTTCGACAAGATCGGAAAGCTTGTCTCCTACGCGCCCGAGGTAACTGCTCATGTCCAACAAGGTAAAATTACCAAACTCACCGGGGTTAAGACCAAGGAGCTCTTGCTCTGGATCACGCTCAGTGATATCTATGTTGATGACCCTCCCACTGGCAAAATCACCTTCAAGACCCCTGCCGGCCTATTTAGGTCTTTTCCTGTCTCCGCTTTCGAGATTCAGGAGGAGCCTGAGGCTAAGGACACTACTAAGCGCGTGCCGGATACCGCTGAGCCTGTGCAAGTCAAGGAACTCTGA 498 0.5201 MSSLIAEDVKSRSEVYHGDEMCQVKSKELLKEIALPNGLLPLKDMEECGYDRQTGFVWLKQKKSYTHKFDKIGKLVSYAPEVTAHVQQGKITKLTGVKTKELLLWITLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFEIQEEPEAKDTTKRVPDTAEPVQVKEL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1958 165 Gene3D - 5 149 IPR036758 -
Gso3g1958 165 PANTHER T31J12.3 PROTEIN-RELATED 3 153 IPR007493 -
Gso3g1958 165 PANTHER - 3 153 - -
Gso3g1958 165 SUPERFAMILY At5g01610-like 5 144 IPR036758 -
Gso3g1958 165 MobiDBLite consensus disorder prediction 142 165 - -
Gso3g1958 165 Pfam Protein of unknown function, DUF538 27 139 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1958 Gso-Chr3 45119433 45120207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1958 - - gmx:100306660 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1958 3 45119433 45120207 Gso10g1334 10 39661867 39662700 PCT
Gso10g1334 10 39661867 39662700 Gso3g1958 3 45119433 45120207 PCT