Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1957 ATGGCAGATTTGGAAAACATGCTTCTTGAGGCAGCTGGAAGGACTAGTTCTCCGGTGAGCAAGCGGCCCAAGCCAAAGAACTCAAAGGCCAAACGTGAGGGTGGTGCTGGTGCAGCATTCTCTGATGGTGGAAGTGACTCCAGAGATGAAAACTCTGATGAGGGTGCAGGCAAGAAACCACAGAGGTATTCATCCCATGTTCCTTTGAAGAAGAGATTGGACATGAACAAAAGAGGTAATAATAATAATGACCGTGGTGGGGCTGAGTTGGAGGATGGAGTTCCTGATCCAGATAGAGATGGTGGCAGCAGTGAAGAATCTGATGTTGGCAGCGATCTCTACAAGGACGAAGACGACAAGCAGAAGCTTGCAAATATGACAGAACTTGAAAGAGAGATGATTTTGTCTGATAGAGCAACCAAGAAATGTGAAAAGGAATTCAAGAAAAAAATGAGAGTGAAGAGGGAAAACAAAAAAGCAAATGCAAAGACTACTACTACTAATACTACTACTGCAAATTCATCTCATCATCCTTCTTCTGTCAAGGTTCGTTCCTCGGCTAGACATGCTGAAAGGACGGCTTCAAAGGGAGACGTACTAAGCGAATTGCGCGCAAAAAGGAAGAAGCAACAAGTCTTAGAACCTCGTGATAAATTGCGAAATGCTTTAGGAACAGGCTCAAGTAGCAAGCAGAAACCCGGAATCACAGCAAGTCCAAGTAGCTCTAGTCAGAGTGAGAGTGCTTTTCGGTCAGACAGCGAAAGAGACTCGTCTGATGATGGTGGATTGGGTGACAGTGATGATGACAAGAGCATGCATGAATCGAAGATGCCAACATTTGAGAACATAAGGGACATCACCATTAGGAGGTCGAAGCTTGTGAAGTGGTTGAATGAACCATTTTTTGATGAGTTAATTGTTGGCTGTTTTGTGAGAATTGGCATAGGGAAGTTAGAAAATGTACCTGTCTATAGGCTCTGCATTGTCCAGAGAGTTGATGGGGGTGACCCAAATAAGCATTACAAGGTAGAGAATAGAGTCACTCACAAGTACCTAGTTTGTGTGTGGGGCAGTGATAACTCTGCTAAAAAGTTTCAGATGGCTGTAGTTTCAGATTCTGCACCATTAGAGAAAGAGTTCAGACAGTGGGTTAGAGAACATGAGAGAACTTGCAGCCAGATGCCAAGTAAGATGAGTGTGTTGGAGAAGAAGGAGGCCATAAGAAGAACTAGCAAGTATGTTTATTCAGCTGCCACAGTGAAGCAGATGCTAGAGGAGAAAAAATCTGTTCCATCTAGGCCACTGAATGTTGCAGTGGAGAAGGATCGGTTGAAGAACCTGTTGGAGGTAGCAAAAAGTAAGAATGATGAGGCAGAGATGGATAGGATCTTGAAAAAGCTTGTGGAATTGGAAGCATCTCGTAGAACCTGGGAGAATGATGCCAAGGCTGTGAGGCTGGCTGAGATGAACAGGAAGAACAGGGTTGAGAACTTCAAGATGTTGTCTGAACAAAAACAGTTCAATACAAATTTGAAGGCTGGAGAGGAAGGCGTTGATCCCTTTTCGAGGAGGTGGACGAGGTCGAGGAATTACTATGGGAAAGAAGCTGAGAAGAATGAAGATAAAAGAGAAAAGGATGGTGAAGTTAGTAAGGTGGGAGAAAAAGAACAAGAAAAAGGAGGTGTTACAACAAAGGTTGGTGTTGAAGTCACAGAATTGGCATTGCAAGCTGCAGCTAATGCAGGGAAGTTGATTGATACCAATGCTCCTGTAGATGGTGGAACAGAATTACATATGCTGCATGATTTTGACTTGCCTATCTCTTTGGCCGAACTCAAGAGTTTTGGGGGACCACAGGGACTCAAAAATGGGTTTCTGGCAAGGAAACAAAAAATAGAAGCAACAGTTGGGTGCCAGGTTTCTGAGAAGGATGGGAGTAGGCATGCTCTTACATTATCTATCAGTGACTACAAGAGAAGAAGAGGACTTCTGTGA 1995 0.4386 MADLENMLLEAAGRTSSPVSKRPKPKNSKAKREGGAGAAFSDGGSDSRDENSDEGAGKKPQRYSSHVPLKKRLDMNKRGNNNNDRGGAELEDGVPDPDRDGGSSEESDVGSDLYKDEDDKQKLANMTELEREMILSDRATKKCEKEFKKKMRVKRENKKANAKTTTTNTTTANSSHHPSSVKVRSSARHAERTASKGDVLSELRAKRKKQQVLEPRDKLRNALGTGSSSKQKPGITASPSSSSQSESAFRSDSERDSSDDGGLGDSDDDKSMHESKMPTFENIRDITIRRSKLVKWLNEPFFDELIVGCFVRIGIGKLENVPVYRLCIVQRVDGGDPNKHYKVENRVTHKYLVCVWGSDNSAKKFQMAVVSDSAPLEKEFRQWVREHERTCSQMPSKMSVLEKKEAIRRTSKYVYSAATVKQMLEEKKSVPSRPLNVAVEKDRLKNLLEVAKSKNDEAEMDRILKKLVELEASRRTWENDAKAVRLAEMNRKNRVENFKMLSEQKQFNTNLKAGEEGVDPFSRRWTRSRNYYGKEAEKNEDKREKDGEVSKVGEKEQEKGGVTTKVGVEVTELALQAAANAGKLIDTNAPVDGGTELHMLHDFDLPISLAELKSFGGPQGLKNGFLARKQKIEATVGCQVSEKDGSRHALTLSISDYKRRRGLL* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1957 664 Gene3D - 277 410 IPR036128 GO:0003677
Gso3g1957 664 MobiDBLite consensus disorder prediction 249 277 - -
Gso3g1957 664 SMART rtf1 277 389 IPR004343 GO:0003677
Gso3g1957 664 MobiDBLite consensus disorder prediction 534 560 - -
Gso3g1957 664 Coils Coil 441 480 - -
Gso3g1957 664 MobiDBLite consensus disorder prediction 222 248 - -
Gso3g1957 664 SUPERFAMILY Plus3-like 279 408 IPR036128 GO:0003677
Gso3g1957 664 MobiDBLite consensus disorder prediction 184 216 - -
Gso3g1957 664 ProSiteProfiles Plus3 domain profile. 277 412 IPR004343 GO:0003677
Gso3g1957 664 MobiDBLite consensus disorder prediction 89 151 - -
Gso3g1957 664 MobiDBLite consensus disorder prediction 1 277 - -
Gso3g1957 664 MobiDBLite consensus disorder prediction 162 181 - -
Gso3g1957 664 PANTHER PLUS-3 DOMAIN PROTEIN 1 664 - -
Gso3g1957 664 Pfam Plus-3 domain 282 386 IPR004343 GO:0003677
Gso3g1957 664 PANTHER UNCHARACTERIZED 1 664 - -
Gso3g1957 664 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1957 Gso-Chr3 45113470 45115500 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1957 K15178 - gmx:100793188 1168.68