Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1953 ATGGCAAGAGTGGTGGCACTCCAACAGAACCAACTATCTTTCTCTACCTTAGCTTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCAAACTCAACTTCAGTTCAAGAGAAAGCAATGCCATCCAAAAGGGTCTTTCTACGTCTCCGCATCGAGCACCAAGAAAATCCTAATAATGGGAGGCACCAGGTTTATTGGTGTGTTTTTGTCTAGGCTCCTTGTCAAAGAGGGTCACCAGGTGACTTTATTCACAAGAGGTAAAGCGCCTGTCACTCAACAGTTGCCAGGTGAATCAGACAGTGATTATGCTGATTTTTCTTCCAAGATCTTGCATTTGAAAGGAGACAGGAAGGACTTCGACTTTGTAAAATCCAGTCTCTCAGCAGAGGGATTTGATGTTGTTTATGACATAAATGGACGCGAGGCAGATGAAGTTGAACCCATACTGGATGCTCTGCCTAATCTGGAGCAGTTTATTTACTGCTCTTCTGCCGGTGTCTATCTCAAATCTGATCTATTACCTCACGCAGAGACTGATGCAGTTGATCCTAAGAGCAGACACAAGGGAAAGCTTGAGACAGAGAGTTTGCTACAAGCAAGGGGTGTTAATTGGACATCTATAAGGCCAGTCTACATCTATGGACCCTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCATAGATTGAAAGCGGGACGCCCAATTCCTATCCCCGGCTCAGGAATACAGATAACCCAACTTGGTCATGTTAAGGATTTGGCAAAAGCTTTTATCCAGGTTCTTGGTAATGAGAAGGCCAGCAAGGAAGTATTCAACATCTCGGGAGATAAGTATGTCACATTTGATGGATTAGCAAGAGCATGTGCTAAGGCTGGTGGGTTCCCAGAGCCAGAGATCATTCACTACAACCCTAAAGATTTTGATTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGCATTTCTTTGCATCAGTTGAGAAAGCAAAGAGCGTGCTTGGATTGGAACCTGAATTTGGACTTGTAGAGGGTCTAGCAGACTCGTACAACCTGGACTTTGGTAGAGGAACATATCGGAAAGAGGCTGATTTCTCAACAGATGACATAATTCTTGGCAAGAGTCTTGTTAGCGTATAA 1137 0.4389 MARVVALQQNQLSFSTLASSLSDFSGTRLQTQLQFKRKQCHPKGSFYVSASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDSDYADFSSKILHLKGDRKDFDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLQARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLAKAFIQVLGNEKASKEVFNISGDKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPEFGLVEGLADSYNLDFGRGTYRKEADFSTDDIILGKSLVSV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1953 378 Gene3D - 51 351 - -
Gso3g1953 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 51 371 - -
Gso3g1953 378 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
Gso3g1953 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 350 IPR036291 -
Gso3g1953 378 CDD SDR_a1 54 307 - -
Gso3g1953 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 51 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1953 Gso-Chr3 45094578 45098332 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1953 - - gmx:100791076 757.288