Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1917 ATGTCGCAGATACCGAAGGAGCCGGAGCAGGTGATGAAGATGAGAGGAGGATGTGTGTTGGGAAAGAAAACGATTCTCAAGAGCGACCATTTCCCTGGTTGCCAGAACAAGCGTTTGTCGCCTCAGATCGATGGGGCTCCCAATTATCGCCAGGCATCTGACTCGTTGCATGTTCACGGTGTTGCCATTCCAACCGTTCATGGAATTCGGAATGTTCTCAATCACATTGGCGCTCGATTGAAAGTTCTCTGGATAAGCCTTCGTGAGGAACCGCTTGCCTACATTAATGGCCGTCCCTTTGTTTTGCGTGACGTGGAGAGGCCATTCTCCAATCTTGAGTATACGGGAATTAATAGGGAAAGGGTTGAGCAAATGGAAGCTCGTTTGAAAGAAGACATCCTCGCGGAAGCTGCAAGATATGGAAATAAGATTCTTGTGACTGATGAACTGCCAGATGGGCAGATGGTGGACCAATGGGAGCCGGTGTCATGTGATTCTGTGAAGACACCACTAGAGGTGTATGAGGAATTGCAAGTGGAGGGATATCTTGTTGATTATGAACGTGTTCCTATAACTGATGAAAAATCACCAAAGGAATTGGATTTTGATATTCTGGTTAATAAAATTTCTCAAGCTGATGTAAATACGGAGATAGTTTTTAATTGTCAAATGGGGCGTGGGCGAACTACAACTGGAATGGTCATTGCAACTTTGGTATACCTCAATCGAATTGGGGCCTCTGGATTTCCAAGAAGCAATTCAATCGGTAGAATTTTTCAAAGTATGACCAATGTTGCTGATCATTTGCCTAACTCAGAAGAGGCAATTCGCAGAGGAGAGTATGCAGTCATAAGAAGCTTGATTCGGGTGTTAGAGGGTGGTGTTGAGGGGAAAAGACAAGTTGACAAAGTCATCGACAAATGTGCTTCAATGCAGAATCTGCGTGAAGCAATTGCCACCTATCGCAATAGCATTTTGCGACAGCCTGATGAGATGAAAAGGGAGGCATCACTATCTTTTTTTGTGGAGTACCTGGAGAGATACTACTTTTTAATATGTTTTGCTGTGTACATTCATTCAGAAAGGGCTGCACTCCGTTCTAATACTGCTGATCACTGTAGTTTTGCTGACTGGATGAGAGCAAGGCCGGAACTCTACAGCATTATTCGCAGGTTACTCAGGAGAGATCCAATGGGTGCACTTGGATATTCAAGTTTGAAACCATCTTTAAAAAAGATAGCTGAATCTACTGATGGCCGCCCTTCTGAGATGGGTGTGGTTGCTGCCTTGAGAAAGGGTGAGGTTCTTGGTAGTCAAACTGTTCTCAAAAGTGATCACTGTCCCGGATGTCAAAACCCAAGTTTACCTGAGAGAGTGGATGGTGCTCCTAATTTCCGAGAAGTTCCTGGATTTCCAGTTTATGGAGTGGCAAATCCAACCATTGATGGTATTCGATCTGTCATTCGAAGGATTGGTAGCTCCAAAGGTGGACGCCCAATACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAACCATTTGTTCTTCGTGAAGTTGAAAGGCCATACAAAAACATGCTGGAATACACAGGCATTGGCCGTGACAGAGTGGAGAAAATGGAAGCTCGATTAAAAGAGGATATCCTGCGGGAAGCTAAACAGTATGGTGGTGCCATAATGGTTATTCATGAAACGGATGATAAGCATATATTTGATGCTTGGGAGGATGTTACCTCTGATGTGATTCAAACCCCACTTGAAGTTTTCAAAAGTCTGGAAGCTGAGGGGTTCCCCATTAAGTATGCACGTATGCCCATCACTGATGGAAAAGCTCCTAAAAGCTCTGATTTTGACACTTTGGCAAATAATATTGCTTCTGCTGCAAAGGACACTGCTTTTGTTTTCAATTGTCAGATGGGTAGGGGCAGGACAAGCACTGGTACTGTCATAGCTTGCCTTGTGAAACTTCGAATTGATTATGGTAGGCCCATTAAAATACTGGGTGGTGATGTGACCCATGAAGAATCAGACTGTGGTTCTTCAAGTGGAGATGAAACTGGGGGTTATGTCAATACATTATCCTCCAATACATTGCAAAGAAAGACAGACGATGAACAAAATCGTGCTTTTGGTATAAATGACATCCTTCTGTTATGGAAGATAACAACATTATTTGATAATGGTGTTGAATGCCGAGAAGCCTTAGATGCTATTATTGATAGATGTTCTGCACTTCAAAACATTCGTCAAGCAGTCTTACAGTATAGAAAAGTATTCAATCAACAGCATGTCGAGCCAAGGGTAAGGAGGGTGGCGTTAAATCGTGGTGCTGAGTACTTGGAGCGGTACTTTCGTCTAATTGCTTTTGCAGCATATCTTGGAAGTGAAGCATTTGATGGATTTTGTGGACAAGGAGAATCCAAAATGACGTTTAAGGTTTGGTTGCATCAGAGGCCAGAGGTGCAGGCTATGAAATGGAGTATCAGATTAAGACCAGGGCGATTTTTCACTGTCCCTGAAGACTTGAGAGAACCACAAGAGTCTCAGCATGGTGATGCAGTGATGGAGACCATTGTCAAGGCCAGAAACGGTTCTGTTTTGGGGAAAGGCTCCATACTGAAAATGTATTTCTTTCCTGGTCAGAGAACTTCCAGTCACATACAAATACATGGTGCACCTCATGTTTACAAGGTTGATGAATACCCTGTGTATTGCATGGCAACTCCAACCATCTCTGGTGCCAAGGAGATGCTAGACTATTTGGGTGCTAAGCCTAAACCTTCCCTCACTGCTCAAAAAGCTATATTGACCGATCTGAGAGAAGAAGCAGTTGTTTATATCAATTATACTCCCTTTGTCCTGAGGGAGTTAAATAAACCAGTTAATACACTCAAGTATGTAGGAATTACTGGTCCTGTGGTGGAACACATGGAAGCACGGCTAAAAGAAGATATACTAGCTGAGATTAGGCAGTCTGGTGGGCGAATGCTATTACACCGTGAAGAATATAACCCCTCAACAAATCAGTCAGGTGTGGTTGGATACTGGGAAAATATTCGAGCAGATGACGTGAAGACACCTGCAGAAGTTTATTCTGCTCTTAAAGATGATGGATATGATATTGTCTACCAGAGGATACCTTTAACAAGAGAGAGGCATGCTTTGGCCTCTGACATTGATGCAATACAGTATTGTCAAGATGACTCTGCAGGTAGTTACCTTTTTGTATCACACACAGGCTTTGGTGGAGTCGCGTATGCAATGGCCATAATCTGTATCAGACTTGATGCTGGATCCAAAGTCTCACAGCCATTATTCGGTCCTCATATAGATGCCGTGACTGAAGAGGACTTGCCTTCTCAAACTTCTAATGAAATGGCACTTAGTATGGGTGACTATCGTGACATTTTGAACCTTACAAGGGTCCTCATACATGGTCCCCAGAGCAAAGCAGATGTTGACATTGTCATTGAAAGATGTGCAGGCGCAGGGCATATACGAGAAGATATTCTTTATTATAATAGAGAATTTGAGAAGTTCACAGATGATGATGACGAGGAACGTGGGTATCTTATGGACATGGGTATCAAGGCTTTGAGGCGATATTTTTTCCTTATCACATTCAGATCGTATCTCTACTGCACCTCTCCTGCCAATACGGAATTTGCAGCATGGATGGATGCAAGACCAGAACTTGGTCATCTATGTAACAATCTAAGAATTGATAAATAA 3744 0.43 MSQIPKEPEQVMKMRGGCVLGKKTILKSDHFPGCQNKRLSPQIDGAPNYRQASDSLHVHGVAIPTVHGIRNVLNHIGARLKVLWISLREEPLAYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILAEAARYGNKILVTDELPDGQMVDQWEPVSCDSVKTPLEVYEELQVEGYLVDYERVPITDEKSPKELDFDILVNKISQADVNTEIVFNCQMGRGRTTTGMVIATLVYLNRIGASGFPRSNSIGRIFQSMTNVADHLPNSEEAIRRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYIHSERAALRSNTADHCSFADWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLKKIAESTDGRPSEMGVVAALRKGEVLGSQTVLKSDHCPGCQNPSLPERVDGAPNFREVPGFPVYGVANPTIDGIRSVIRRIGSSKGGRPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIGRDRVEKMEARLKEDILREAKQYGGAIMVIHETDDKHIFDAWEDVTSDVIQTPLEVFKSLEAEGFPIKYARMPITDGKAPKSSDFDTLANNIASAAKDTAFVFNCQMGRGRTSTGTVIACLVKLRIDYGRPIKILGGDVTHEESDCGSSSGDETGGYVNTLSSNTLQRKTDDEQNRAFGINDILLLWKITTLFDNGVECREALDAIIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESKMTFKVWLHQRPEVQAMKWSIRLRPGRFFTVPEDLREPQESQHGDAVMETIVKARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVYKVDEYPVYCMATPTISGAKEMLDYLGAKPKPSLTAQKAILTDLREEAVVYINYTPFVLRELNKPVNTLKYVGITGPVVEHMEARLKEDILAEIRQSGGRMLLHREEYNPSTNQSGVVGYWENIRADDVKTPAEVYSALKDDGYDIVYQRIPLTRERHALASDIDAIQYCQDDSAGSYLFVSHTGFGGVAYAMAIICIRLDAGSKVSQPLFGPHIDAVTEEDLPSQTSNEMALSMGDYRDILNLTRVLIHGPQSKADVDIVIERCAGAGHIREDILYYNREFEKFTDDDDEERGYLMDMGIKALRRYFFLITFRSYLYCTSPANTEFAAWMDARPELGHLCNNLRIDK* 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1917 1247 Pfam Inositol hexakisphosphate 942 1097 - -
Gso3g1917 1247 Pfam Inositol hexakisphosphate 85 239 - -
Gso3g1917 1247 Pfam Inositol hexakisphosphate 503 659 - -
Gso3g1917 1247 SMART PTPlike_phytase_2 85 240 - -
Gso3g1917 1247 SMART PTPlike_phytase_2 941 1099 - -
Gso3g1917 1247 SMART PTPlike_phytase_2 503 659 - -
Gso3g1917 1247 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 9 244 IPR029021 -
Gso3g1917 1247 CDD PTP_paladin 431 746 - -
Gso3g1917 1247 CDD PTP_paladin 15 308 - -
Gso3g1917 1247 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 1 336 - -
Gso3g1917 1247 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 423 601 - -
Gso3g1917 1247 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 340 481 - -
Gso3g1917 1247 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 602 1247 - -
Gso3g1917 1247 Gene3D Protein tyrosine phosphatase superfamily 442 674 IPR029021 -
Gso3g1917 1247 Gene3D Protein tyrosine phosphatase superfamily 24 278 IPR029021 -
Gso3g1917 1247 Gene3D Protein tyrosine phosphatase superfamily 878 1107 IPR029021 -
Gso3g1917 1247 PANTHER METAL ION-BINDING PROTEIN 602 1247 - -
Gso3g1917 1247 PANTHER METAL ION-BINDING PROTEIN 1 336 - -
Gso3g1917 1247 PANTHER METAL ION-BINDING PROTEIN 340 481 - -
Gso3g1917 1247 PANTHER METAL ION-BINDING PROTEIN 423 601 - -
Gso3g1917 1247 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 861 1086 IPR029021 -
Gso3g1917 1247 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 428 660 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1917 Gso-Chr3 44713665 44724201 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1917 - - gmx:100806263 2493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1882 19 47537250 47548331 Gso3g1917 3 44713665 44724201 GST