Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1881 ATGGCTGCGATCGCGGGAGCGCACGTGTTTGGTGTTGTGAGTTTTCAGCTCAAGCAAGCTGAAATGCCCTTTGCATGTTCCAGCTTAATCCGCAAGCATATTGGAGATTCTCCTCAGCGCAATGTGGCTCTAAGACGCAGAGCAAATGGAACAATTCTTCCCCAAATCAGAGCCCAGAACGTTCTTCCAGACTATGTTCCAAAATCGGAGTTTTATAAAGTAGAAGCCATTCTCAGGCCCTGGCGAGTCCCTCAGGTTTCTTCGGCTATGTTGAAAATGGGAATTCGCGGTGTCACTGTATCTGATGTCAAGGGCTTTGGTTCTCAGGGTGGTTCAAAAGAGAGACAGGGAGGCTCTGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAAATGGAAATAGTAGTGAGAAAGGACCAGGTTGAGGCAGTAATTGACAAAATTATCGAGGAGGCAAGGACTGGGGAGATTGGTGATGGCAAAATTTTCTTGATCCCCGTCTCAGATGTTATAAGAATTCGAACAGGTGAGCGTGGGGAGCAGGCAGAGAGGATGACTGGGGGCCGAAGTGATATGCTATCTGCTGTATGA 591 0.4687 MAAIAGAHVFGVVSFQLKQAEMPFACSSLIRKHIGDSPQRNVALRRRANGTILPQIRAQNVLPDYVPKSEFYKVEAILRPWRVPQVSSAMLKMGIRGVTVSDVKGFGSQGGSKERQGGSEFSEDNFVAKVKMEIVVRKDQVEAVIDKIIEEARTGEIGDGKIFLIPVSDVIRIRTGERGEQAERMTGGRSDMLSAV* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1881 196 PRINTS P-II protein signature 72 87 IPR002187 GO:0006808|GO:0030234
Gso3g1881 196 PRINTS P-II protein signature 93 111 IPR002187 GO:0006808|GO:0030234
Gso3g1881 196 PRINTS P-II protein signature 123 146 IPR002187 GO:0006808|GO:0030234
Gso3g1881 196 PRINTS P-II protein signature 154 174 IPR002187 GO:0006808|GO:0030234
Gso3g1881 196 SUPERFAMILY GlnB-like 72 182 IPR011322 -
Gso3g1881 196 SMART P_II_3 74 176 IPR002187 GO:0006808|GO:0030234
Gso3g1881 196 Gene3D - 60 192 IPR015867 -
Gso3g1881 196 ProSiteProfiles P-II protein family profile. 71 183 IPR002187 GO:0006808|GO:0030234
Gso3g1881 196 PANTHER NITROGEN REGULATORY PROTEIN P-II HOMOLOG 31 192 - -
Gso3g1881 196 Pfam Nitrogen regulatory protein P-II 72 179 IPR002187 GO:0006808|GO:0030234
Gso3g1881 196 ProSitePatterns P-II protein C-terminal region signature. 154 167 IPR017918 GO:0006808|GO:0030234
Gso3g1881 196 PANTHER NITROGEN REGULATORY PROTEIN P-II 31 192 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1881 Gso-Chr3 44367653 44371438 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1881 - - gmx:100499915 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1846 19 47162789 47166550 Gso3g1881 3 44367653 44371438 GST