Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1865 ATGGGTTTCAACAAAAGTTACCTTCTTTTCACCGTGTCCCTCTCATTTCTCCTCCTATCCACCCATGCCATCAGCAGCATTATTGCTCCTTCTCCCTCCCCATTCCCAACCCACACCAACACCAAAACCAAAACCATAGACTCCATCTTCAAGAAAGCCCTCTCAAAAACCCAAAACATGTTAAAATCACCCAACCCCAAGGTCCTAGACTTCTGCAAATCCACAGAGAACCCAACCCTCTGCGGCGATACCATTGCCCCATTCTTCCAAGGCTCCTTCTTCGACCCCATCAAGGCCCTCCTGAACGAAGTTGAAGCCACGCATAACCAAACCTTGAAGGTCGCCGACGTCATTGCAAACACACTCAACGACCCCAACACCAACAGAAACGCACGTGAGCCACTCGACATATGCAGGTCACGATACAAAAGCATTGTTAGTACCATCAAAGAGGCCGTGGAGTTGCTGAACCAACAGAACGTAGTTGATGCTTATTACAAGTTCAGCTCCGTTATTTCGGACCAGACAACTTGCGAAGACGCGTTTGTGGAATCACCCGGAGCTCAATTTCCTTTCCCTGATGACTCTCTCACTGTGTATCAGCTTGCTGGCAATTGCTTGGCCATCATGGATGAGATAGTTAATAGTCATAACCAGTTTTTCTTCGCTTGA 672 0.4777 MGFNKSYLLFTVSLSFLLLSTHAISSIIAPSPSPFPTHTNTKTKTIDSIFKKALSKTQNMLKSPNPKVLDFCKSTENPTLCGDTIAPFFQGSFFDPIKALLNEVEATHNQTLKVADVIANTLNDPNTNRNAREPLDICRSRYKSIVSTIKEAVELLNQQNVVDAYYKFSSVISDQTTCEDAFVESPGAQFPFPDDSLTVYQLAGNCLAIMDEIVNSHNQFFFA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1865 223 PANTHER PECTINESTERASE 1 217 - -
Gso3g1865 223 SMART PMEI_2 63 209 IPR006501 GO:0004857
Gso3g1865 223 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 217 - -
Gso3g1865 223 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 213 IPR035513 -
Gso3g1865 223 Pfam Plant invertase/pectin methylesterase inhibitor 70 209 IPR006501 GO:0004857
Gso3g1865 223 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 214 IPR035513 -
Gso3g1865 223 CDD PMEI-like_2 65 213 - -
Gso3g1865 223 TIGRFAM PME_inhib: pectinesterase inhibitor domain 56 212 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1865 Gso-Chr3 44215244 44216529 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1865 - - gmx:102660506 436.802