Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1818 ATGGAACGCTCTACAAAACTCTTCTCGGCGGCGTTGGTTCTCTTCGTGGTTGTGGTGGCACACCGGGCAGCAGCCTCACAGGATCTAAAAGGAAAGAAGCTAATCAACAAGGTATGCACAATCGCCCCAAGCAGAGACCTCTGCGTTCAAATCCTCTCATCGGACCCAATAAGAAGCCCTAACGCAGACCTCAAGGACTTGGCTGTTATCTCCCTTAGGGTTGCTGCCAGAAACGCTTCCGGCATCCTCAGCGACACCAAAATGTTGATCGACGACGACAACCTAGACCCCGACGTCCAACAAGGTTTGGCTGATTGCAAGGAGACAATCTTGGACGCCGAGAGCCAGCTCGAGGACACCATTGCTTCTTTGTTGGTTGGTTCCGACACCGACGCACAGGTTTGGCTCAAGGCTGCCGTGGCCGCAATCGACACCTGCGACGCTTCCATTCCCGGAGACGACGACGTTCTCTCCGTCAAGAGTGCCATGTTCCGCAGGCTGTGCAACATTGCCATTGCCATCAGCAAGCTCTTGAACAAACCACTTAAATTCTAA 555 0.5333 MERSTKLFSAALVLFVVVVAHRAAASQDLKGKKLINKVCTIAPSRDLCVQILSSDPIRSPNADLKDLAVISLRVAARNASGILSDTKMLIDDDNLDPDVQQGLADCKETILDAESQLEDTIASLLVGSDTDAQVWLKAAVAAIDTCDASIPGDDDVLSVKSAMFRRLCNIAIAISKLLNKPLKF* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1818 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 178 IPR035513 -
Gso3g1818 184 SMART PMEI_2 30 174 IPR006501 GO:0004857
Gso3g1818 184 Pfam Plant invertase/pectin methylesterase inhibitor 34 174 IPR006501 GO:0004857
Gso3g1818 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 178 IPR035513 -
Gso3g1818 184 PANTHER PECTINESTERASE 1 180 - -
Gso3g1818 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 178 IPR006501 GO:0004857
Gso3g1818 184 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1818 Gso-Chr3 43848513 43849390 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1818 - - gmx:100785595 331.257