Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1814 ATGCTCTCATCCAAACCTCCGCGCCGGAAAGTTGTTCCGGCGAACGGCGATGACTCCGCCGACAAACTCGACCAGCTCCTCCTCTCCTCTGCCATCTCCAACAACGAGGACCTAGGCCCGTTCATCCGCAAGGCCTTCACCTCCGGCAAGCCGGAAACGCTCCACCACCACCTCCGCCACTTCGCGCGGTCGAAGGAGTCAGAGATCGAAGAGGTGTGCAAGGCTCACTACCAGGACTTCATCCTCGCCGTCGACGACCTCCGATCCCTCCTCTCCGACGTCGATTCACTCAAGTCCTCCCTCTCCGACTCCAACTCGCGCCTCCAGCACGTCGCGCGCCCTCTCCTCTCCTCGCTCGATGCCTTCGTCGAGACGCGCAACGTCTCCAAGAACGTCAACCTCGCCATCGACTCCGTCCGCACGTGCGTCAAGCTCATGGAGGTCTGCACACGCGCCAACCGCCACCTTGCCGACGACAACTTCTACATGGCGCTCAAGTGCGTCGACGCGATCGAGCGCGAGTACTTGGACCAAACGGCGTCGTCCACGCTGAGGCGGATGCTGGAAAAGAAGATTCCGGAGATTCGGTCCTACATCGAGAGGAAGGTGAACAAGGAGTTCGGTGACTGGTTGGTGGAGATCCGTGTCGTGAGTCGCAATTTAGGTCAATTAGCGATAGGTCAAGCCTCGGCGGCGAGGCAGAGAGAAGAAGACCTAAGAATTAAGCAGCGCCAAGCGGAGGAACAGAGTAGGCTCAGCGTGAGGGACTGTATTTATGCATTGGAGGAAGAGGATGAAGACGGAATCATCGCCGGCGGGATCGGAGAAGACGGCGGTGGAGCCGCCGGGTTTGATTTGACTTCTCTGTGTAGAGCGTATCATATTCACCAGACTTTAGGGTTAGAGGATCGGTTTAAGCAGTATTATTTTGAGAACAGGAAGCTTCAGTTGACTTCGGATTTTCAGGTTTCGTCGATGACTCCTTTTCTGGAGTCTCATCAAACGTTCTTTGCGCAGATTGCAGGGTTCTTCGTGGTGGAGGATCGTGTTTTGAGGGCCGGGGGTGGGTTGATTTCGAAAATGGAAGTTGAGAACCTTTGGGATATTGCTGTTAGTAAAATGTGTTCTGTGTTGGAGGATCAGTTCTCTAGAATGCAAACTGCCAATCATTTATTGCTTATTAAGGATTATGTGAGTCTGTTAGGAGTGACGCTGCGGAGATATGGGTATCCCATTGATGCGTTGCTTGATGTTTTGAGCAAACATAGGGATAAGTACCATGAGTTGCTTTTGTCTGACTGTAGGAAGCTGATTGCGGAGGCAGTTGCGGCTGATAAATTTGAGCAGATGTTGATGAAGAAGGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATACAGACTTCGGATATCATACCTGCTTTTCCCTATGTGGCGCCATTTTCGTCCACTGTGCCAGATTGTTGTAGGATTGTGCGGTCCTTCATTGAGGATTCTGTGAGTTTCATGTCATATGGAGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAGTATTTAGACAGGCTTTTGAGTGAGGTTTTGGATGAAGCTTTAGTGAAGCTTATCAATACATCAATTAATGGGGTTTCCCAGGCAATGCAGATGGCAGCGAATATGGCTGTCTTGGAGCGTGCTTGTGATTTCTTCTTTCGCCATGCTGCACAGCTTTCAGGTGTTCCCTTGAGAATGGTGGAGAGAAGCAGAAGGAACTTCCCTCTAAGAAAAGCTCGTGATGCTGCTGAAGAGATGCTCTCTGGGCTACTCAAAGCCAAAGTTGATGGATTTATGACATTGATCGAGAATGTAAATTGGATGGGTGACGAGGCACCTCAGAGTGGAAATGAATATGTAAACGAGGTCATAATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCTTCTCAAGTCCTTAAGAGAGTATTACAGGAAGTTTTTGCTCACATATCGGAGAAGATAGTTGGGACTTTAGTTAGTGATTCTGTTAAGAGGTTTAATGTAAATGCTATTACTGGAATTGAAGTTGACATCCGGCTCTTAGAATCATTTGCTGATAATCAGGCCTCCCTTTTCTCTGATGGGGATGTTGATGTTCTGAGAGCATCACTTGCCAGCTCAAAGCAACTGATTAATTTGCTGTTAAGCAATCATCCAGAGAACTTCTTGAATCCAGTGATCAGGGAGAGGAGTTACAATACTTTGGACCACAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAGGGATCCTTCCGATCGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCGAGGCAGAATCCCAAAAGGAAATCATTGGATACATTGATAAAAAGACTTAGGGATGTTAGCTGA 2397 0.4852 MLSSKPPRRKVVPANGDDSADKLDQLLLSSAISNNEDLGPFIRKAFTSGKPETLHHHLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLSDSNSRLQHVARPLLSSLDAFVETRNVSKNVNLAIDSVRTCVKLMEVCTRANRHLADDNFYMALKCVDAIEREYLDQTASSTLRRMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASAARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIIAGGIGEDGGGAAGFDLTSLCRAYHIHQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRAGGGLISKMEVENLWDIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKLIAEAVAADKFEQMLMKKEYEYSMNVLSFQIQTSDIIPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLSEVLDEALVKLINTSINGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRNFPLRKARDAAEEMLSGLLKAKVDGFMTLIENVNWMGDEAPQSGNEYVNEVIIYLEILVSTAQQILPSQVLKRVLQEVFAHISEKIVGTLVSDSVKRFNVNAITGIEVDIRLLESFADNQASLFSDGDVDVLRASLASSKQLINLLLSNHPENFLNPVIRERSYNTLDHKKVVIVSEKLRDPSDRLFGTFGSRGARQNPKRKSLDTLIKRLRDVS* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1814 798 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 590 737 IPR042044 -
Gso3g1814 798 Pfam Exocyst complex subunit Sec15-like 458 762 IPR046361 -
Gso3g1814 798 PANTHER SEC15 7 798 IPR007225 GO:0006886|GO:0090522
Gso3g1814 798 Coils Coil 229 249 - -
Gso3g1814 798 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 7 798 - -
Gso3g1814 798 PIRSF Sec15 4 798 IPR007225 GO:0006886|GO:0090522
Gso3g1814 798 Gene3D - 412 583 IPR042045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1814 Gso-Chr3 43821854 43824621 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1814 K19985 - gmx:100784539 1484.93