Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1810 ATGGATTTAGAGTTTGAATATCAAGAAGAATACAGGAGGAACTCAAGGGGAGTGCAACTCTTCACTTGCAAATGGTTGCCTCTCTCTTCTCCGAAGGGCCTGGTTTTCCTTTGCCATGGTTATGGTATGGAATGCAGTGGCTTCATGAGAGAATGTGGTGTACGGCTAGCGTGTGCCAAATATGCTGTGTTCGGTATGGATTATGAAGGGCATGGACGTTCTGAAGGTGCTCGTTGTTACATAAAAAAATTTGATAACATCGTTAACGATTGTTATGACTTTTTCAAGTCAGTCAGCGAGCTGCAAGAGTATAAGGCAAAGGCTAGATTCTTGTATGGAGAGTCCATGGGAGGAGCAGTGAGCCTTCTTTTACATAAAAAGGACCCTTCATTCTGGGACGGTGCAGTTCTCGTCGCACCCATGTGTAAGATAAGGAAAAACAAGTTGATATACCAGGACAAGCCAAGGCTAAAAACAGCATTAGAAATGTTGAGAATCAGCATGAGCCTTGAAGACAGCTTATATAAGGTGACCCTGCCGTTTTTTGTATTGCATGGAGAAGCTGATACAGTGACAGATCCAGAAGTAAGCAGGGCATTATATGAGCGAGCCAGTAGCAAAGATAAGACCATAAAATTGTACCCTGGAATGTGGCATGGCTTAACATCGGGGGAGACTGATGAGAACATCGAAAAAGTCTTTGCAGACATTATAATGTGGCTAGACAAGCACACCAGCAATGCCACTCATGCTTCATCACAACAAATTGAGACTTGTAACTATGGGATTGAGAGATTTACAACAGTTGCATCATCACCAAAGATTGTAAAGCAAGCAAACGGGCGAAGAAGCTATCTTTGTGGGTTGAAAGGAAACCGCATGCTATACCACTCAGCAATTTAA 903 0.4286 MDLEFEYQEEYRRNSRGVQLFTCKWLPLSSPKGLVFLCHGYGMECSGFMRECGVRLACAKYAVFGMDYEGHGRSEGARCYIKKFDNIVNDCYDFFKSVSELQEYKAKARFLYGESMGGAVSLLLHKKDPSFWDGAVLVAPMCKIRKNKLIYQDKPRLKTALEMLRISMSLEDSLYKVTLPFFVLHGEADTVTDPEVSRALYERASSKDKTIKLYPGMWHGLTSGETDENIEKVFADIIMWLDKHTSNATHASSQQIETCNYGIERFTTVASSPKIVKQANGRRSYLCGLKGNRMLYHSAI* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1810 300 Pfam Serine aminopeptidase, S33 30 147 IPR022742 -
Gso3g1810 300 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 144 - -
Gso3g1810 300 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 143 258 - -
Gso3g1810 300 Gene3D alpha/beta hydrolase 6 146 IPR029058 -
Gso3g1810 300 Gene3D alpha/beta hydrolase 147 250 IPR029058 -
Gso3g1810 300 SUPERFAMILY alpha/beta-Hydrolases 8 245 IPR029058 -
Gso3g1810 300 PANTHER PHOSPHOLIPASE-RELATED 8 144 - -
Gso3g1810 300 PANTHER PHOSPHOLIPASE-RELATED 143 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1810 Gso-Chr3 43786764 43791322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1810 48 300 Acyl Lipid Metabolism Gene Families AT2G47630 54.072 6.56e-112 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1810 K18368 - gmx:100783471 618.616