Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1797 ATGCCTTCTAATGATCTCAAACATCGGGTCACCACCACTACAGCAACCACCAACGACGTCAATAGGACCAGCAGAGGCAAACGAATGCTGATGGCCAAACGCGGCCTTAAGTCACTCGCCATAGCCGTTGTCCTCCCTCTCTCTCTCACCGCCTTATCAGCTTACATAGGCTCCTCCTCCTCCAGTGCCCATTACGCTTCGAGAAGCCCCTTCTGGTTCCCACCCTCGTGGGCCCTACACTTGACGTGTCCTGCTTCAAGCTTCTTGATGGGTCTCTCTGCTTGGATGGTGTGGGCAGACGGGGGTTTCCACAGAAACCCCATGGCTCTGTTGCTTTACTTCACTCAGCTCCTCTTCACGGTGCTGTGGGACCCCCTTGTCTTTGCCCTTGGGGCAACACGGCTAGGCTTAATCTTGTGTGTTTCCTTATTTCTCACCCAGTTTGGCTGCATGCGCTTGTTTCGCCCTTTCAATCCCATCGCTGCTGATTTGATAAAGCCTTGTTTGGCATGGGTTGCTTTCCTCTCTATTCTAAATCTTAAGCTCCTTTTTGTCTGA 558 0.5215 MPSNDLKHRVTTTTATTNDVNRTSRGKRMLMAKRGLKSLAIAVVLPLSLTALSAYIGSSSSSAHYASRSPFWFPPSWALHLTCPASSFLMGLSAWMVWADGGFHRNPMALLLYFTQLLFTVLWDPLVFALGATRLGLILCVSLFLTQFGCMRLFRPFNPIAADLIKPCLAWVAFLSILNLKLLFV* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1797 185 Pfam TspO/MBR family 42 183 IPR004307 GO:0016021
Gso3g1797 185 Gene3D TspO/MBR protein 34 184 IPR038330 -
Gso3g1797 185 PANTHER TSPO/MBR-RELATED PROTEIN-RELATED 17 182 - -
Gso3g1797 185 PIRSF PBR 28 185 IPR004307 GO:0016021
Gso3g1797 185 CDD TSPO_MBR 70 180 IPR004307 GO:0016021
Gso3g1797 185 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 17 182 IPR004307 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1797 Gso-Chr3 43703788 43704923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1797 K05770 - gmx:100785785 365.54