Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1771 ATGGCTAAAGGCGAGGGACGTATTGAGCTTAAATTCCGCATATATGATGGAACTGATATAGCACATAGTACATATTCTTCATCTACCGCAGTTGGTACCCTTAAGCAAAAGCTAGTTGCTGAGTGGCCTCAAGGCAAACCAGTTACACCAATGTCTGTAAGTGACCTAAAACTTATACATGCTGGTAAAGTTTTGGAAAACAACAAAACTCTTGCTGATTCCAGAATAACGTTTGGTGACATCCCTGGGGATGTTGTTACAATGCATGTTGTAGTACAACCTCGAGTAACTAAAAAGAAAACAGAGAAGAATAAGGAGAACAAGCAAAAGATGAATTCATGCTCATGCACTATACTTTAG 360 0.3917 MAKGEGRIELKFRIYDGTDIAHSTYSSSTAVGTLKQKLVAEWPQGKPVTPMSVSDLKLIHAGKVLENNKTLADSRITFGDIPGDVVTMHVVVQPRVTKKKTEKNKENKQKMNSCSCTIL* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1771 119 Gene3D - 1 101 - -
Gso3g1771 119 CDD Ubl_MUBs_plant 8 95 - -
Gso3g1771 119 Pfam Ubiquitin-2 like Rad60 SUMO-like 8 117 IPR039540 -
Gso3g1771 119 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
Gso3g1771 119 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 119 IPR040015 -
Gso3g1771 119 PIRSF MUB 1 119 IPR017000 -
Gso3g1771 119 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 119 - -
Gso3g1771 119 SUPERFAMILY Ubiquitin-like 5 98 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1771 Gso-Chr3 43508478 43511037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1771 - - gmx:100818909 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1737 19 46260182 46264083 Gso3g1771 3 43508478 43511037 GST