Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1768 ATGAGCAGCCAGACGTCGAAGCCGAACGTGGATGGAGTGCACATCGATGTGAAGGTTGTGGAGAGGCCAATGAGAGAAAGGCCCTACGATCTGTTGCTGCGGTTTCTTGGCCTTTCACTCACTCTTGTGGCAGTCATCATCGTTGGTGTTGACAATGAGACCAAAGTCATCTCCTATGCCGAAATGCAGTTCAAAGCCACTGCTAAGTGGGAATATGTCTCTGCCATTGTGTTTTTCTTGGTGATAAACGCGATAGCATGCTCATACGCAGCTGCATCATTGGTTATCACATTGATGGCAAGAAGCAATGGAAGAAAAAACGATGTGACACTGTTGGGGCTAACAGCGCTAGATCTTGTGATGATGGCTTTGTTGTTCTCGGCCAATGGTGCAGCTTGTGCAGTGGGAGTGATAGCACAGAAGGGGAACTCGCACGTGCAATGGATGAAAGTGTGCAACGTCTTTGATGCCTATTGTCGCCACGTCACTGCAGCATTGGTCCTCTCCATCATTGGATCCACGGTCTTTCTCTTGCTCGTGCTCCTTTCTGTTCTCAAACTCCATTACAGAACAGGAATTTAG 582 0.4828 MSSQTSKPNVDGVHIDVKVVERPMRERPYDLLLRFLGLSLTLVAVIIVGVDNETKVISYAEMQFKATAKWEYVSAIVFFLVINAIACSYAAASLVITLMARSNGRKNDVTLLGLTALDLVMMALLFSANGAACAVGVIAQKGNSHVQWMKVCNVFDAYCRHVTAALVLSIIGSTVFLLLVLLSVLKLHYRTGI* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1768 193 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 11 190 - -
Gso3g1768 193 PANTHER CASP-LIKE PROTEIN 1E1 11 190 - -
Gso3g1768 193 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 31 186 IPR006459 -
Gso3g1768 193 Pfam Casparian strip membrane protein domain 28 173 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1768 Gso-Chr3 43488761 43490494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1768 - - gmx:100817307 363.229