Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1734 ATGAGCTTCTTCGTTTCGTTTGATGTCAACAGCATGTCAAATTTCTCCTCCTGGTACTCTCGTTTTCGTTTTTCGGCCAAGTACTTGTACTGCTACCACCGCACTCTCCACAAAAACGCACCCAGCACCATCTTCAACAACCACGGAACCAGGAAGAACGCATGGCCAACCTCTCTGCTTCCTTTGGCGCTCGCTGTTTCCGCTGGATCACTCGCTCTTCAACCACACTTCAATCCTTCCTTCTGCGACACCGACGACAGAGGTGTGGGTGTTGGGGGCAAAGGCAGCACGCAATACGTTGTTAAGGGATCACAGAAAGAATTTCCGCGGGAGCTTCTTCAGGATTTGAAAATCGTCTGTCAGGATAACATATCTCTTGATTATGATGAAAGATATATCCATGGAAAACCACAAAACAGCTTTCACAAGGCTGTCAATATCCCAGATGTGATTGTTTATCCAAGATACGAAGAGGAGGTCTCTAAGATTGTCAAATTATGCAACAGTCATAAGGTTCCTATTGTACCATATGGTGGAGCTACATCAATTGAGGGTCACACCTTATCCCCTCATGGAGGAGTTTGCATTGACATGTCATTAATGAAAAGAGTGAAAGAATTACATGTTAATGACATGGATGTTGTTGTTGAGCCTGGCATTGGATGGATGGAGCTTAATGAGTATTTGGAACCTTATGGCCTATTTTTTCCACTTGATCCAGGTCCTGGTGCTAGCATTGGAGGCATGTGTGCTACACGTTGCTCCGGTTCATTAGCTGTGAGGTATGGCACTATGCGTGATAATGTCATCAGTCTCAAGGTGGTTCTTGCCAATGGAGACATTGTGAAGACTGCATCACGTGCTAGGAAGAGTGCTGCAGGGTATGATTTGACCCGCTTGATGATTGGAAGTGAAGGAACACTTGGTGTTATAACAGAAGTAACCCTGCGGCTTCAGAAAATTCCCCAGTATTCAGTGGTTGCAATGTGCAATTTCCCTTCTGTGAAGGATGCAGCAGATGTTGCTATTGCCACCATGATGTCTGGTATACAGGTGTCAAGGGTAGAGCTATTGGATGAAGTTCAAGTGAAAGCTATCAATATTGCTAATGGGAAGAATTTGCCTGAATGTCCAACTTTAATGTTTGAATTTATAGGAACAGAGGCATATGCACGTGAACAAACACAAATTGTTCGGAAACTTGTTTCTGAGCACAATGGCTCAGATTTTGTATTCGCAGAAGAACCTGAAGCAAAAAAAGAACTTTGGAAGGTAAGGAAAGAGGCACTCTGGGCTTGCTTTGCAATGGAACCAAATCTGGTGGCAATGACTACAGATGTATGTGTTCCTTTATCTCACCTTGGCGATTTAATTTCAAGGTCTAAAAAGGAGCTGGATGCATCACCACTAGTTTGCACAGTAATTGCGCATGCTGGTGATGGTAATTTCCACACGGTTATTTTATTTGATCCTAACCAAGAAGAACAGCGGCGGGAGGCAGAGAGACTCAACCAGTTTATGGTTCATGCTGCCTTGTCATTAGAAGGAACTTGTACCGGTGAACATGGTGTTGGAACTGGAAAAATGAAGTATCTTGAAGAAGAACTCGGAGTGGAAGCATTGAGGACAATGAAAAAAATAAAAGCAGTCCTAGATCCCAACGATATCATGAATCCAGGAAAGCTCATCCCTCCCCATGTTTGTTTCTAG 1710 0.4374 MSFFVSFDVNSMSNFSSWYSRFRFSAKYLYCYHRTLHKNAPSTIFNNHGTRKNAWPTSLLPLALAVSAGSLALQPHFNPSFCDTDDRGVGVGGKGSTQYVVKGSQKEFPRELLQDLKIVCQDNISLDYDERYIHGKPQNSFHKAVNIPDVIVYPRYEEEVSKIVKLCNSHKVPIVPYGGATSIEGHTLSPHGGVCIDMSLMKRVKELHVNDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPSVKDAADVAIATMMSGIQVSRVELLDEVQVKAINIANGKNLPECPTLMFEFIGTEAYAREQTQIVRKLVSEHNGSDFVFAEEPEAKKELWKVRKEALWACFAMEPNLVAMTTDVCVPLSHLGDLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPNQEEQRREAERLNQFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKAVLDPNDIMNPGKLIPPHVCF* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1734 569 Gene3D - 523 563 IPR016171 -
Gso3g1734 569 Gene3D - 441 522 - -
Gso3g1734 569 PANTHER D-LACTATE DEHYDROGENASE 84 565 - -
Gso3g1734 569 Gene3D - 107 341 IPR016169 -
Gso3g1734 569 SUPERFAMILY FAD-linked oxidases, C-terminal domain 326 565 IPR016164 GO:0003824|GO:0050660
Gso3g1734 569 ProSiteProfiles PCMH-type FAD-binding domain profile. 144 321 IPR016166 GO:0071949
Gso3g1734 569 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 84 565 - -
Gso3g1734 569 Pfam FAD linked oxidases, C-terminal domain 321 562 IPR004113 GO:0003824|GO:0050660
Gso3g1734 569 Pfam FAD binding domain 148 284 IPR006094 GO:0050660
Gso3g1734 569 SUPERFAMILY FAD-binding/transporter-associated domain-like 117 322 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1734 Gso-Chr3 43197966 43208898 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1734 K00102 - gmx:100803612 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1734 3 43197966 43208898 Gso3g1734 3 43197966 43208898 ECH