Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1677 ATGGCAACGAGCTTTCAGTTTACAATCATTGGGTTTTGTTTATTTTCTCTGTTGTGTTTCACCATCACTTTTGCCTATGTTATACCAAGATTTCCTTCTTCAATGCTCCATCCAGCGCTAGATGTTAACTTGCTTTCTGCCCAAAATGGGCTTTACACAGCAAAGTTCTTCACCCAAACACTCGATCACTTCAATTATAATCCCCAGAGCTATCAGACTTTTCAACAAAGATATCTCATCAATGATACCTATTGGGGTGGTGCCAAGAACAATGCTCCAATCTTTGTCTACATGGGAAATGAAGGGGACATAGAATGGTTCGCACAAAACACAGGCTTCATGTTCGAAACAGCACCTTATTTCAAAGCCCTTTTGGTTTTTATAGAGCATAGATACTATGGAAAATCATTTCCATTTGGGGGAAACGAGGAGGTTGCAGATGCAAATACCACTACAGTTGGATATATGAGCTCCACACAGGCATTGGCTGATTATGCCACTCTCATCATTGATCTCAAGAATAATTTATCAGCAACAGATTCCCCTGTTGTTGTCGTTGGAGGATCCTATGGAGGAATGCTGGCTGCATGGTTTAGAATGAAGTATCCTCATGTTGCCATTGGAGCCTTGGCATCCTCTGCTCCAATCCTCCAATTTCTGGATTTGGTTTCACCCTATACCTACACTGATATCATCACTCAAGACTATAAGAGCGAGAGTGAGAATTGTTATAAAGTGATTAAAGGGTCTTGGAAACAAATAGAGGACACAGCCCAAAAACCTGGAGGACTAGAACAACTACGGAAATCGTTCAGAATATGCAAGCATTATATAAGCGCAGGTGCTCTGGTATATTGGCTTCAAATGGCTTTGGGTTCTGCGGCCATGACAGATTATCCAACACCTTCCGTTTTCCTAGCTCCTTTGCCTGCTTATCCAGTGAGAAAGATGTGCGAGGCGATTGATAACTTATCCGCTGTAAATGAAACGTTCACTAAGTTGTATGCAGCAGCTAATATCTTCTACAACTATACTGGGACTGCCACATGTTTTTTTTTGGATAATACTACTGCTCCTCTCGGGGGATGGGATTGGCAGGCATGTACGGAGTTGATAATGCCCTTGGGTGCGAACAATGAGGGGAGCATGTTTCCCCCTTACAAATGGAAGCTCAGAGACGTAGAGTTTTACTGCAAACGTGTCTATCACATACAGCCAAGACCTCATTGGATTACCACTGAGTTTGGTGGCCATGACATTAAGAGGGTTCTAAAAAGGTCTGGGAGCAACATTATCTTCTTTAATGGTTTAAGAGACCCTTGGAGCGGTGGAGGGGTGTTGAAGAATATTTCAGAAACTATAGTTGCTATAGTAGCAAAAGAAGGAGCTCATCATGTGGACCTAAGGTTCTCAACTACGGAAGATCCAGAATGGCTAAAGGATATAAGGAAACGAGAGATAAAAATCATAGCAAACTGGATCTCTCAATATTATCAAGACCTACTAAATCAATGA 1515 0.4185 MATSFQFTIIGFCLFSLLCFTITFAYVIPRFPSSMLHPALDVNLLSAQNGLYTAKFFTQTLDHFNYNPQSYQTFQQRYLINDTYWGGAKNNAPIFVYMGNEGDIEWFAQNTGFMFETAPYFKALLVFIEHRYYGKSFPFGGNEEVADANTTTVGYMSSTQALADYATLIIDLKNNLSATDSPVVVVGGSYGGMLAAWFRMKYPHVAIGALASSAPILQFLDLVSPYTYTDIITQDYKSESENCYKVIKGSWKQIEDTAQKPGGLEQLRKSFRICKHYISAGALVYWLQMALGSAAMTDYPTPSVFLAPLPAYPVRKMCEAIDNLSAVNETFTKLYAAANIFYNYTGTATCFFLDNTTAPLGGWDWQACTELIMPLGANNEGSMFPPYKWKLRDVEFYCKRVYHIQPRPHWITTEFGGHDIKRVLKRSGSNIIFFNGLRDPWSGGGVLKNISETIVAIVAKEGAHHVDLRFSTTEDPEWLKDIRKREIKIIANWISQYYQDLLNQ* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1677 504 Gene3D alpha/beta hydrolase 56 494 IPR029058 -
Gso3g1677 504 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 2 504 - -
Gso3g1677 504 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 2 504 - -
Gso3g1677 504 Gene3D Serine carboxypeptidase S28, SKS domain 224 388 IPR042269 -
Gso3g1677 504 SUPERFAMILY alpha/beta-Hydrolases 111 468 IPR029058 -
Gso3g1677 504 Pfam Serine carboxypeptidase S28 59 485 IPR008758 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1677 Gso-Chr3 42652619 42657036 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1677 K01285 - gmx:100787376 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1645 19 45369429 45376603 Gso3g1677 3 42652619 42657036 GST