Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1658 ATGGTTCTCCCAAAGTGTCGCTATATCTCTGTAGTTTTTTTCGCCTTTGTTGTGTTACTGATCAACAATGGCGTTGAAGCTTTTCATAAAGTATATCCTCATCTTCAATCTGTTTCTACGATATCCGTGAGCGGACAACACAGAACTGCGTACCATTTTCAACCTCCTAAGAACTGGATTAACGATCCAAATGGACCCATGTATTACAAGGGAATCTATCATCTATTCTACCAATACAACCCCAAAGGGTCAGTGTGGGGTAACATTGTGTGGGCTCACTCAGTGTCAAAGGATCTCATCAATTGGAGGTCCCTTGAACATGCACTTTACCCATCCAAACCATTTGACAAGTTCGGGTGTTGGTCTGGGTCAGCCACCATAGTCCCAGGTAAAGGACCAGTGATCCTCTACACCGGAGTTGTTGACGACAAACAAACTCAGGTTCAATGCTATGCTATACCTGAAGACCTAAACGACCCACTCCTCCAAAAATGGGTTAAACCTGACAAATTCAACCCAATCTTGGTTGCTAACAAGGGTGTCAACGGTAGTGCGTTTCGCGACCCAACGACGGCATGGTTGAGCAAGGACGGTCACTGGAAGATATTGGTGGGTAGTAGAAAGAATCTTACAGGTATAGCTTATTTGTATAGGAGCAAGGACTTTATGAATTGGGTGCAAGCCAAACATCCGATCCATTCCAAGGGTGCAACTGGTATGTGGGAGTGTCCTGATTTTTATCCAGTTTTGCTTAGAGGCAATGCAGGGTTGGAGACGTCCGAGGAGGGGAATCATGTGAAGTACGTGTTTAAGAATAGTCTTGACATTACAAGGTTCGACTACTATACAGTGGGAACATATTTTAAAGATAAGGATAGATATGTCCCCGATAACACCTCAGAGGATGGTTGGGGTGGACTTAGGTATGACTATGGTAATTTTTATGCTTCCAAGTCATTTTTTGACCCCAGTAAAAATCGAAGAATCTTGTGGGGTTGGGCAAATGAGTCTGATACCAAGGAAGATGATGTTCGCAAAGGATGGGCGGGAATTCAGGCGATTCCGCGAACTGTGTGGCTTGATTCTACTGGGAGACAATTGGTGCAATGGCCTGTTGAAGAATTAAACAATCTCAGAGGGAAAGAAGTTAATATGAACAGTCAAAAGCTTCAAATGGGAGATTACGTTGAAGTAAAAGGAATCACTGCTGCCCAGGCAGATGTGGAAGTTACATTCTCATTTGCAAGCTTGGACAAGGCAGAGACATATGATCCTAAGTGGGTAAACGCACAGGACCTCTGTGCCCTAAAGGGTTCAAAACTTCAAGGTGGAGTTGGACCATTTGGGCTTCTCACATTAGCTTCTCAAAATTTTGAGGAGTTCACTCCTGTGTTTTTTAGAATTTTCAAAGGTCCAGATAAGCATGTGGTTCTCTTATGCTCAGATGCAAGAAGTTCCTCTTTGAAGAGTAGTATGTACAAGCCATCATTTGCTGGTTTTGTAGATGTGGATTTGGCCACTAAAAGGAAACTCTCTCTTAGGAGTTTGATTGATCACTCAGTAGTGGAGAGTTTTGGTGAAGGAGGAAAGACAAACATTTTGTCTCGTGTTTATCCACAACTAGCAGTAGCAAATCAAGCTCAGTTGTTTGTGTTCAACAATGGAACTGAACCCATCTCGGTGGAAAACCTCAAAGCATGGAGCATGAACCCTGCTGATATAAAATAA 1728 0.4306 MVLPKCRYISVVFFAFVVLLINNGVEAFHKVYPHLQSVSTISVSGQHRTAYHFQPPKNWINDPNGPMYYKGIYHLFYQYNPKGSVWGNIVWAHSVSKDLINWRSLEHALYPSKPFDKFGCWSGSATIVPGKGPVILYTGVVDDKQTQVQCYAIPEDLNDPLLQKWVKPDKFNPILVANKGVNGSAFRDPTTAWLSKDGHWKILVGSRKNLTGIAYLYRSKDFMNWVQAKHPIHSKGATGMWECPDFYPVLLRGNAGLETSEEGNHVKYVFKNSLDITRFDYYTVGTYFKDKDRYVPDNTSEDGWGGLRYDYGNFYASKSFFDPSKNRRILWGWANESDTKEDDVRKGWAGIQAIPRTVWLDSTGRQLVQWPVEELNNLRGKEVNMNSQKLQMGDYVEVKGITAAQADVEVTFSFASLDKAETYDPKWVNAQDLCALKGSKLQGGVGPFGLLTLASQNFEEFTPVFFRIFKGPDKHVVLLCSDARSSSLKSSMYKPSFAGFVDVDLATKRKLSLRSLIDHSVVESFGEGGKTNILSRVYPQLAVANQAQLFVFNNGTEPISVENLKAWSMNPADIK* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1658 575 Pfam Glycosyl hydrolases family 32 N-terminal domain 52 371 IPR013148 -
Gso3g1658 575 SUPERFAMILY Arabinanase/levansucrase/invertase 43 372 IPR023296 -
Gso3g1658 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 371 571 IPR013320 -
Gso3g1658 575 CDD GH32_Fruct1-like 58 360 - -
Gso3g1658 575 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 2 575 - -
Gso3g1658 575 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 575 - -
Gso3g1658 575 Pfam Glycosyl hydrolases family 32 C terminal 374 568 IPR013189 -
Gso3g1658 575 ProSitePatterns Glycosyl hydrolases family 32 active site. 52 65 IPR018053 GO:0004553|GO:0005975
Gso3g1658 575 Gene3D Glycosyl hydrolase domain; family 43 56 384 IPR023296 -
Gso3g1658 575 Gene3D - 385 569 - -
Gso3g1658 575 SMART glyco_32 52 529 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1658 Gso-Chr3 42502200 42506642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1658 24 570 Glycoside Hydrolase AT2G36190 64.043 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1658 K01193 - gmx:100799008 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1658 3 42502200 42506642 Gso3g1658 3 42502200 42506642 ECH
Gso19g1634 19 45248699 45253645 Gso3g1658 3 42502200 42506642 GST