Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1655 ATGAGCAGATCAGGGCAACCACCGGATTTGAAGAAGTACATGGACAAGAAGCTTCAGATCAAGCTGAATGCAAATCGCATGGTTGTTGGTACTCTCCGTGGCTTCGACCAGTTTATGAATTTAGTTGTTGACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAACAGGACTTGA 240 0.4458 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVNRT* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1655 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
Gso3g1655 79 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Gso3g1655 79 PIRSF Lsm7 5 78 - -
Gso3g1655 79 SUPERFAMILY Sm-like ribonucleoproteins 9 76 IPR010920 -
Gso3g1655 79 SMART Sm3 8 72 IPR001163 -
Gso3g1655 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Gso3g1655 79 Gene3D - 1 76 - -
Gso3g1655 79 Pfam LSM domain 9 71 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1655 Gso-Chr3 42480597 42481794 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1655 K11099 - gmx:100305530 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1655 3 42480597 42481794 Gso3g1655 3 42480597 42481794 ECH
Gso19g1631 19 45232022 45233265 Gso3g1655 3 42480597 42481794 GST