Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1641 ATGCCGTCGATACCAGAAGAACCACTCCTGACTCCGAACCCAGACCGGTTCTGCATGTTCCCAATCCAATACCCTCAAATCTGGGAAATGTATAAGAAAGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGTGGACCTCTCGCAGGACCTCCGCCACTGGGCCACCCTCAGCGACGGCGAGCGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTAGAAAACCTCGCCGGCCGCTTCACCAAAGAAATCCAACTCCCGGAGGCCCGCGCTTTCTACGGCTTCCAAATCGCCATCGAAAATATCCACTCCGAAATGTACAGCCTCCTCTTAGAAACCTACATCAAAGACTCCACAGAAAAAAATCGTCTGTTTCGCGCCATAAACACCATCCCATGCATCACCAAAAAAGCCCAGTGGGCCCTCCGCTGGATCGATGCCTCAGAATCCTTCGCGGAGCGCCTCGTGGCATTCGCTTGCGTCGAGGGAATATTCTTCTCCGGAAGCTTCTGCGCGATATTTTGGCTCAAGAAGCGTGGGTTAATGCCGGGGCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAGGGGCTTCACTGCGACTTCGCGTGTCTCTTGTACTCGCTTCTCAGGAAGAAGCTTAGTGAGGAGCGCGTGAGGGAGATTGTGCGTGACGCGGTGGAGATTGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGTGCGTTGGTGGGGATGAACGGGGAGTTGATGAGTCGGTATATTGAGTTTGTTGCGGATCGGTTGCTGGATGCGCTTGGGTGTGGGAAGGTGTACGGTGCTCAGAATCCCTTTGATTGGATGGAGCTTATTTCGCTTCAGGGGAAAACTAACTTCTTTGAGAAGCGCGTTGGGGAGTACCAGAAGGCTTCTGTTATGTCTAGCTTGAATGGTAATGGAGGGGCGCATGTCTTCAAGATGGATGAGGATTTTTAA 990 0.5434 MPSIPEEPLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWATLSDGERHFITHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETYIKDSTEKNRLFRAINTIPCITKKAQWALRWIDASESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVREIVRDAVEIEREFVCDALPCALVGMNGELMSRYIEFVADRLLDALGCGKVYGAQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGAHVFKMDEDF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1641 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 329 - -
Gso3g1641 329 SUPERFAMILY Ferritin-like 4 307 IPR009078 -
Gso3g1641 329 Coils Coil 218 238 - -
Gso3g1641 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Gso3g1641 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
Gso3g1641 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 329 IPR000358 GO:0009263
Gso3g1641 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Gso3g1641 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1641 Gso-Chr3 42391027 42392475 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1641 K10808 - gmx:100779885 669.463