Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1638 ATGGCGACATGTTATACACCTTCGAATGTTAGAAATTCGCCGGGGGTGCTGGCTGTAGTTGGAGGAAGAACAATTTCAGAGAATCACGTAGGTAACAGATCATGCTTCCTGAGAATTCAAGAGAGCAAGACCGTGTTTGGCAGCAATCGAAAGTGTGGTTCATTTCAAGTGAAGTGTTCTGCGATCAGTCGCAAGGATCCTTTTCTGGATCTGCACCCTGAGGTTTCAATGCTCAGAGGAGAAGGAGGGAGTGCATTGAACAGCCCTAGACCTAGAAAGGATGTATCAGGTGGAAACGTGGCCGAAAGTTTGGAAGCCACGACAACTCCGAGTAACTACAATGAAGCTAAGATCAAAGTCATTGGTGTGGGTGGAGGCGGGTCAAATGCGGTCAACCGCATGATAGAGAGCTCCATGAATGGTGTGGAGTTCTGGATTGTTAATACCGATGTTCAAGCCATGAGGATGTCGCCAGTCATTCCTCATAACCGGTTGCAAATCGGCCAGGAGCTTACACGAGGACTTGGCGCTGGTGGTAACCCTGAGATTGGCATGAATGCTGCCAAGGAAAGCAAGGAATCGATACAGGAGGCAGTTTATGGAGCTGATATGGTCTTTGTTACAGCTGGAATGGGTGGAGGAACTGGCACTGGAGGAGCTCCAGTTATTGCAGGTATCACAAAGTCAATGGGTATACTGACTGTTGGTATTGTCACAACCCCTTTTTCATTTGAAGGGCGAAGAAGGGCAGTTCAAGCACAAGAAGGAATTGCTGCATTAAGAGATAATGTTGATACACTGATAGTTATTCCAAATGACAAACTGCTGACTGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTAGACAAGGTGTTCGTGGTATATCTGATATTATTACGATACCAGGATTGGTGAATGTAGACTTTGCAGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGCAAAACAAGGGCAAGAGACGCTGCATTAAATGCTATCCAGTCACCTTTACTAGATATTGGTATAGAAAGGGCTACCGGAATTGTATGGAACATAACTGGTGGAAGTGATTTGACCTTGTTTGAGGTAAATGCTGCAGCAGAAGTTATATATGACCTTGTGGACCCCACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCAGTGGTCAAGTAAGCATCACATTAATTGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAAGGGAGACCTATACAGGCCAGCCAATTTACACAAGGAGATACGGTTGGTATCAACCGGCGATCTTCCTCTTTCACTGATGGTAGCTTTGTTGAGATCCCTGAATTCTTAAAGAAGAAGGGGCGCTCACGTTATCCGAGAGCTTAA 1428 0.4503 MATCYTPSNVRNSPGVLAVVGGRTISENHVGNRSCFLRIQESKTVFGSNRKCGSFQVKCSAISRKDPFLDLHPEVSMLRGEGGSALNSPRPRKDVSGGNVAESLEATTTPSNYNEAKIKVIGVGGGGSNAVNRMIESSMNGVEFWIVNTDVQAMRMSPVIPHNRLQIGQELTRGLGAGGNPEIGMNAAKESKESIQEAVYGADMVFVTAGMGGGTGTGGAPVIAGITKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPIQASQFTQGDTVGINRRSSSFTDGSFVEIPEFLKKKGRSRYPRA* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1638 475 PRINTS Cell division protein FtsZ signature 204 224 IPR003008 GO:0005525
Gso3g1638 475 PRINTS Cell division protein FtsZ signature 232 253 IPR003008 GO:0005525
Gso3g1638 475 PRINTS Cell division protein FtsZ signature 295 317 IPR003008 GO:0005525
Gso3g1638 475 PRINTS Cell division protein FtsZ signature 318 339 IPR003008 GO:0005525
Gso3g1638 475 CDD FtsZ_type1 128 420 IPR000158 GO:0003924|GO:0005525
Gso3g1638 475 SMART Tubulin_4 117 311 IPR003008 GO:0005525
Gso3g1638 475 Pfam Tubulin/FtsZ family, GTPase domain 117 278 IPR003008 GO:0005525
Gso3g1638 475 ProSitePatterns FtsZ protein signature 2. 203 224 IPR020805 GO:0005525
Gso3g1638 475 Gene3D - 327 436 IPR037103 -
Gso3g1638 475 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 2 473 - -
Gso3g1638 475 Hamap Cell division protein FtsZ [ftsZ]. 113 444 IPR000158 GO:0003924|GO:0005525
Gso3g1638 475 SMART Tubulin_C_4 313 430 IPR018316 -
Gso3g1638 475 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 2 473 IPR045061 GO:0003924|GO:0005525
Gso3g1638 475 SUPERFAMILY Tubulin C-terminal domain-like 310 424 IPR008280 -
Gso3g1638 475 TIGRFAM ftsZ: cell division protein FtsZ 109 432 IPR000158 GO:0003924|GO:0005525
Gso3g1638 475 Pfam FtsZ family, C-terminal domain 328 422 IPR024757 -
Gso3g1638 475 Gene3D Tubulin/FtsZ, GTPase domain 106 326 IPR036525 -
Gso3g1638 475 SUPERFAMILY Tubulin nucleotide-binding domain-like 116 314 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1638 Gso-Chr3 42367764 42373303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1638 K03531 - gmx:100778286 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1638 3 42367764 42373303 Gso3g1638 3 42367764 42373303 ECH
Gso19g1615 19 45112878 45120121 Gso3g1638 3 42367764 42373303 GST