Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1629 ATGGCCTCGCTTGTCAACAACGCTAACGGCGCCGTCAATGGTTTTCCTGGAATATCCCAGAAGCTCATTATCGATACCGACCCTGGGATCGATGATAGCATGGCCATTCTTATGGCTTTTCAAAGTCCAGATGTGGAGGTTCTGGGTTTGACAACCATTTTTGGTAATACAACTACCGAACTTTCAACACTCAATGCTTTGCTTTTGTGTGAGATGGCAGGCCGTGAAGATATTCCAGTTGCACAGGGAAGCCATGAGCCATTGAAGGGTGGAAAGCCTCGTGTTGCTGATTTTGTTCATGGTAAAGATGGACTAGGGAACACATTCCTACCCCCACCTAAAGGTGAGAAAATTGAGAAAAGTGCTAGTGAGTTTTTGGTAGAGAAAGTCTCTGAATATCCTGGTGAAGTATCTGTGCTAGCACTTGGACCACTAACAAATTTGGCTTTGGCAATCAAAAGGGATTCTTCCTTTGCAAGCAAAGTGAAGAGAATAGTTATACTTGGTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCCAATATCCATGGAGACCCGGAAGCCGCAGATATTGTGTTTACCTCTGGGGCAGATATTGTTGTTATTGGAATAAACATTACAACCCAAGTCCAATTCACAGATGCTGATCTCCTCGAACTGAAGGAATCTAAAGGAAAGTATGCTCCCTTCTTGAGTGACATATGCAAATTCTATAGGGACTTTCATGTAAAATCTGATGGTGTCCACGGAATTTTCCTCCACGATCCTGTAAGTTTTGTGGCAGTTGTGCGTCCAGATCTTTTCACATACAAGAAGGGGGTAGTGAGGGTAGAAACACAAGGCATCTGTGTTGGGCATACACTTATGGACCAAGGATTGAAAAACTGGAATACGAGCAACCCATGGACGGGTTATTCTCCTGTTGCAGTTGCTTGGACAGTGAATCTCGAGGAAGTTCTTGATTATATCAGGGAGCTGGTGATGAAACCCTGA 1005 0.4438 MASLVNNANGAVNGFPGISQKLIIDTDPGIDDSMAILMAFQSPDVEVLGLTTIFGNTTTELSTLNALLLCEMAGREDIPVAQGSHEPLKGGKPRVADFVHGKDGLGNTFLPPPKGEKIEKSASEFLVEKVSEYPGEVSVLALGPLTNLALAIKRDSSFASKVKRIVILGGAFFALGNVNPAAEANIHGDPEAADIVFTSGADIVVIGINITTQVQFTDADLLELKESKGKYAPFLSDICKFYRDFHVKSDGVHGIFLHDPVSFVAVVRPDLFTYKKGVVRVETQGICVGHTLMDQGLKNWNTSNPWTGYSPVAVAWTVNLEEVLDYIRELVMKP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1629 334 Pfam Inosine-uridine preferring nucleoside hydrolase 22 324 IPR001910 GO:0016799
Gso3g1629 334 PANTHER URIDINE NUCLEOSIDASE 1 19 334 - -
Gso3g1629 334 Gene3D - 17 334 IPR036452 GO:0016799
Gso3g1629 334 SUPERFAMILY Nucleoside hydrolase 20 331 IPR036452 GO:0016799
Gso3g1629 334 CDD nuc_hydro_CaPnhB 21 327 - -
Gso3g1629 334 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 19 334 IPR023186 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1629 Gso-Chr3 42276587 42279924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1629 K01240 - gmx:100818908 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1606 19 45025506 45028516 Gso3g1629 3 42276587 42279924 GST