Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1621 ATGGAGGTCTCAGACGACGTCGACGACGAACACGTTATCCTGCTTTGCACTAACACTGATCCGATCGAAACAACGGAAACCCTAAACGACGAGATTCTCGTGTCCGCCACCGATGTCCTCGCTTGGGATCTCCCTACGACTCTCACTTTTCCGACTATTAAAGTTCAGACACATCGCAATAGGCTCATTGAACGATCTCTGTATTTTCGTGGTCTTCTCAGCAGGAGCTTCAGTGAATCATGCTTGGGATCTGTCACCATCAATTGGAATGTGAGGGAATTTATGCAAATTCTTAAGCATATGTATGGCTGCGTATTGGATATTACGCTGGATAATTTCCTTCCTCTTTATGAGGGTGCGCTTTATTTTGGAGTGGAGACACTTCTCTTGAAGTGTGAGACGTGGCTTTCTGAGTTACTCTCACCCAAAAGGTTTCAATCTACTCAAATACAAATGGAGGACTTGATCCAAATTTGGGAATTTGGCTCTGATTGTGCTAGTGACTTTATCCTGCACTTATGTATGGGCTATCTAGCAAGAAATTTTATGTGGGCAAAGCATAGCAAGTCTTTTGGGAAACTTCCATATGACCTGCTATTATCTTTAGTAAAGCATCCTCATTTGACTGTTGACAGTGAGTTGCATCTTTCTGATGCACTTCTTCTCTGGCTTGAAAGTAACACTGAAAATTTGGAGAGGCCAAGCAAATCCGAAGAGAACTGCTATGAAGTTTTGAAACAAATTCGTGTAGGCCTTTTGCCTTTGTGGTTTGCTCTAGGAAAAAGAAACTCTTTCTATTTTAGACAGCTGGCTGAGGAAAGCCTTGATTCAATTTTCCGACTCCTAAATATTGCTCCTATGGGTTCAATAGATACTTTTGAGTATAGCGACTTGCATCATCTCAGGATTAGGCTGACAGAATATTCAAAGAAAGTGGACCTTTCTGGTTGCCCGCAAATAACATCTACAGTACTTCTTCTGTCACTCATCCCTCAATCATATTTAACAGATCCCATGGAAAAGAATATTATAAAACAGTTCTTTATTAATTGTGGACATCCTATAAGAGATAAATCTGTGTTCCCACTAGAACTGTCAGAAACCTTTACCTTTGAAGCAGTTCAGGAGGTGGATATCTCTAAGTGTCGAAATTTGATTATTGAGCATGCTGTTGATTGCTTCTGCAAGTTCTTTCCTTCTTTAAGAATATTGAAAGCAGCACATCTTTTGAACATTGGGACAATCAGTTTCCTTCAATTATTGGAGAAATGTACAATGGTCTGCGAAATTGACTTAACTGTTGATATTACCCCACTGATACCAGCAGTTACTGTTGCATCTTCTAGTCGTGCTATGATACCACTGGTACCAGAGAAGAGCTCTAGTGTTAACCATATAGCAGTGCAAATCATGCCATATAATGAATTTGGACCTCCTCTTTCTAATGTTACAAAACTCACATTTGAAGGAAGAACTGATGTCAGTGATTTGGGTCTCCAGTACATCTCCAAATTATGTGTTTCATTGCGTCACCTGAATATTAAAGGATGCATTTCTGTCACTGATATTGGCATATCAGATCTCATATCCACGTGTAAAAAACTTAATTCAATTGTGGTTTGTGATACTTCATTTGGGATCTATTCAGTTCAAGCTCTTTGCTCAGCTATTTCTGGTAGTGGCAACTTCCCCTCTCTACATTCTAGAGATAAGCGTTTGAAATCTGTGGTGTCTAATTTTGAAACGCTGCATATGGGTGGCTGCAGGGGTATTAGTGAGTCATCTCTACTAGAGCTTATGTCTCAAGCACAAGTTTTGAAGAGTTTATGCCTGAGATGGACTGACCTGGTTGACCAGGCACTGTACAATTTTGTAGGTTCTTCCTTGGAGATGCTTGATGTTTCTGATACCAAGATTTCTGGAGCTGCATTAGCTCATATTATTCATGGAAATCCAAGTTTAAAGTGTCTGAGAGCAAGAGGCTGTCAAAATTTGTTTCCAGGAAACAATTGTATAGAAAAGAGAAAATCTAGCTTTCCCTCTTTGCATGAAAAACTGCATGCTGAGTTAGGAAAAATGTGTAGATTGGAAGAAATTGAATTTGGATGGGGATTTTCTTCCTTCTCTTTGAGTGCTCTGGAACCTTTACTGATGTCATTAAAGACCATCAATATAAGTTTAGGTGGAACGCTTGGTGAAGATGCTTTGAAACAATTACCTGCAATCTGTCCCTTGCTAGAAACAATAATCCTTCATTTTCAGGTAATATCTGATATGATTGTGATGAACTTTGTCACATCCTTGAAATACTTGCAAGTATTAGCTCTGTGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAATTCCCTATGCAAAATCTAAGAAAGTTGAGGCTTGAAAGAATAACCCCATGGATGACAAATGATGACTTGGTGGTTCTAGCTCAAAACTGCAGAAATTTGTTAGAGCTTTCATTGCTAGGGTGTCCTCTTCTCGACCCAGATTCTCTACAGATAATTACATGTGGATGGCCAGGCTTGGTCTCTATCCATTTAGAGGACTGTGGAGAAGTAACGGCTAATGGGGCTTCTGCTCTTCTTGACTGCAAAGCTCTTGAAGATATCCTGCTGCGTCATAATGGCCCTGGGCTACCCAGAAACTTCATTTGTTATGCTGCTTCAGAGATGCGATTGCTTCGAAAATTGTCACTGGATATATGCGATGCAAGTGAAGGTGATTTTGACATTCCAAATCAGTATGCAGACAAATACTTTTTGAGTACCTTGAAGATAGCTAGATGCAAATCTCAAAGATGTGCTTTTAATCTCCCAGCCCCTGCCCCAGGGGTTCATAGAAGATCTGTGCATGTTGAAACTCTGGTGCTTGTGTGGAACAGCAGAGATCTCATCAGAACAGTGGTGAAGGAAAGGCTTTAG 2940 0.4017 MEVSDDVDDEHVILLCTNTDPIETTETLNDEILVSATDVLAWDLPTTLTFPTIKVQTHRNRLIERSLYFRGLLSRSFSESCLGSVTINWNVREFMQILKHMYGCVLDITLDNFLPLYEGALYFGVETLLLKCETWLSELLSPKRFQSTQIQMEDLIQIWEFGSDCASDFILHLCMGYLARNFMWAKHSKSFGKLPYDLLLSLVKHPHLTVDSELHLSDALLLWLESNTENLERPSKSEENCYEVLKQIRVGLLPLWFALGKRNSFYFRQLAEESLDSIFRLLNIAPMGSIDTFEYSDLHHLRIRLTEYSKKVDLSGCPQITSTVLLLSLIPQSYLTDPMEKNIIKQFFINCGHPIRDKSVFPLELSETFTFEAVQEVDISKCRNLIIEHAVDCFCKFFPSLRILKAAHLLNIGTISFLQLLEKCTMVCEIDLTVDITPLIPAVTVASSSRAMIPLVPEKSSSVNHIAVQIMPYNEFGPPLSNVTKLTFEGRTDVSDLGLQYISKLCVSLRHLNIKGCISVTDIGISDLISTCKKLNSIVVCDTSFGIYSVQALCSAISGSGNFPSLHSRDKRLKSVVSNFETLHMGGCRGISESSLLELMSQAQVLKSLCLRWTDLVDQALYNFVGSSLEMLDVSDTKISGAALAHIIHGNPSLKCLRARGCQNLFPGNNCIEKRKSSFPSLHEKLHAELGKMCRLEEIEFGWGFSSFSLSALEPLLMSLKTINISLGGTLGEDALKQLPAICPLLETIILHFQVISDMIVMNFVTSLKYLQVLALCYCFGDISMSSFKFPMQNLRKLRLERITPWMTNDDLVVLAQNCRNLLELSLLGCPLLDPDSLQIITCGWPGLVSIHLEDCGEVTANGASALLDCKALEDILLRHNGPGLPRNFICYAASEMRLLRKLSLDICDASEGDFDIPNQYADKYFLSTLKIARCKSQRCAFNLPAPAPGVHRRSVHVETLVLVWNSRDLIRTVVKERL* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1621 979 SUPERFAMILY RNI-like 398 779 - -
Gso3g1621 979 SUPERFAMILY RNI-like 685 935 - -
Gso3g1621 979 SMART BTB_4 49 140 IPR000210 GO:0005515
Gso3g1621 979 CDD BTB_POZ_ZBTB_KLHL-like 52 123 - -
Gso3g1621 979 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN FBL11 59 873 - -
Gso3g1621 979 Gene3D Ribonuclease Inhibitor 565 944 IPR032675 -
Gso3g1621 979 Gene3D Ribonuclease Inhibitor 363 564 IPR032675 -
Gso3g1621 979 Gene3D - 176 278 - -
Gso3g1621 979 SMART LRR_CC_2 480 505 IPR006553 -
Gso3g1621 979 SMART LRR_CC_2 506 531 IPR006553 -
Gso3g1621 979 SMART LRR_CC_2 577 602 IPR006553 -
Gso3g1621 979 SMART LRR_CC_2 819 844 IPR006553 -
Gso3g1621 979 SMART LRR_CC_2 845 870 IPR006553 -
Gso3g1621 979 Pfam BTB/POZ domain 52 137 IPR000210 GO:0005515
Gso3g1621 979 PANTHER UNCHARACTERIZED 59 873 - -
Gso3g1621 979 CDD BACK 153 205 - -
Gso3g1621 979 SMART BACK_2 155 263 IPR011705 -
Gso3g1621 979 Pfam BTB And C-terminal Kelch 156 257 IPR011705 -
Gso3g1621 979 Gene3D Potassium Channel Kv1.1; Chain A 46 166 IPR011333 -
Gso3g1621 979 ProSiteProfiles BTB domain profile. 44 110 IPR000210 GO:0005515
Gso3g1621 979 SUPERFAMILY POZ domain 48 137 IPR011333 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1621 - - gmx:100791594 1941.39