Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1601 ATGGCTACCATCGTTAGCATCAAGGCCCGCCAGATCTTTGACAGTCGTGGCAATCCAACCGTCGAGGTGGATTTGACATGCTCCGATGGTACTTTTGCTAGAGCTGCTGTTCCAAGTGGTGCATCCACTGGGATTTATGAGGCCCTTGAATTGAGAGATGGAGGATCTGACTACCTTGGAAAGGGTGTATCAAAGGCTGTTGACAATGTGAACACCATTATTGCCCCTGCTTTGGTTGGCAAGGACCCAACTCAGCAGACTGCTATTGACAACTTAATGGTTCAACAACTTGATGGAACTGTTAACGAATGGGGTTGGTGCAAGCAAAAGCTTGGAGCAAATGCCATATTGGCAGTGTCTCTTGCAGTCTGCAAAGCTGGTGCTGCTGTCCTGAAAGTTCCTCTTTACAAGCATATTGCAAATATTGCGGGTAACAAAAAGTTGGTTTTGCCTGTTCCTGCTTTCAATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGGTTCTTCCCGTGGGAGCTTCCTCTTTCAAGGAAGCCATGAAGATGGGTGTAGAAGTATATCACAATTTGAAGTCTGTGATTAAGAAGAAATATGGTCAAGATGCAGTAAATGTTGGTGACGAAGGTGGCTTTGCCCCTAACATCCAGGAAAACAAGGAAGGTTTGGAATTGCTGAAAACTGCCATTGCCAAAGCTGGTTACACAGGCAAAGTTGTCATTGGAATGGATGTTGCAGCTTCTGAATTCTACAAGGAAGATAAAACATACGATTTGAACTTCAAGGAAGATAACAATGATGGCTCACAGAAGATCTCTGGAGATGCTTTGAAAGATCTATACAAGTCATTTGTGACAGAGTATCCAATTGTTTCAATTGAGGATCCTTTTGACCAGGATGACTGGGAGCACTATGCTAAGCTTACTGCTGAGGTTGGAACCAATGTACAAATTGTTGGTGATGATCTCTTGGTTACCAACCCCAAGAGGGTTCAGAAGGCAATTGATTCAAAAGCATGCAATGCTCTTCTCCTTAAGGTCAACCAAATTGGTTCTGTGACTGAGAGTATTGAAGCTGTCAGGATGTCCAAAAAAGCTGGATGGGGTGTCATGGCGAGTCACAGAAGTGGAGAGACTGAGGATACCTTCATTGCTGACCTTTCTGTTGGTTTGGCAACGGGTCAAATTAAGACTGGAGCTCCATGCAGGTCAGAGCGTCTTGCTAAATATAACCAGCTCTTGAGAATTGAGGAGGAGCTTGGTGCGGAAGCAGTGTATGCTGGAGCTAACTTCCGTACCCCTGTTGAGCCCTACTAA 1335 0.4464 MATIVSIKARQIFDSRGNPTVEVDLTCSDGTFARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVDNVNTIIAPALVGKDPTQQTAIDNLMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAAVLKVPLYKHIANIAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMVLPVGASSFKEAMKMGVEVYHNLKSVIKKKYGQDAVNVGDEGGFAPNIQENKEGLELLKTAIAKAGYTGKVVIGMDVAASEFYKEDKTYDLNFKEDNNDGSQKISGDALKDLYKSFVTEYPIVSIEDPFDQDDWEHYAKLTAEVGTNVQIVGDDLLVTNPKRVQKAIDSKACNALLLKVNQIGSVTESIEAVRMSKKAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1601 444 Gene3D - 133 443 IPR036849 -
Gso3g1601 444 Pfam Enolase, C-terminal TIM barrel domain 148 439 IPR020810 -
Gso3g1601 444 SUPERFAMILY Enolase N-terminal domain-like 3 144 IPR029017 -
Gso3g1601 444 Gene3D - 1 131 IPR029017 -
Gso3g1601 444 SMART Enolase_N_3 4 139 IPR020811 -
Gso3g1601 444 SFLD enolase 1 426 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 Pfam Enolase, N-terminal domain 4 139 IPR020811 -
Gso3g1601 444 ProSitePatterns Enolase signature. 349 362 IPR020809 -
Gso3g1601 444 SFLD enolase 1 426 - -
Gso3g1601 444 PANTHER ENOLASE 1 444 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 PANTHER ENOLASE 1 444 - -
Gso3g1601 444 Hamap Enolase [eno]. 2 426 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 SMART Enolase_C_3 147 440 IPR020810 -
Gso3g1601 444 PIRSF Enolase 1 439 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 TIGRFAM eno: phosphopyruvate hydratase 4 438 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 CDD enolase 6 425 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 SUPERFAMILY Enolase C-terminal domain-like 147 439 IPR036849 -
Gso3g1601 444 PRINTS Enolase signature 37 51 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 PRINTS Enolase signature 112 128 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 PRINTS Enolase signature 169 182 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 PRINTS Enolase signature 326 337 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 PRINTS Enolase signature 349 363 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Gso3g1601 444 PRINTS Enolase signature 378 395 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1601 Gso-Chr3 41932737 41937259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1601 K01689 - gmx:100811084 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1601 3 41932737 41937259 Gso3g1601 3 41932737 41937259 ECH
Gso19g1584 19 44744538 44748958 Gso3g1601 3 41932737 41937259 GST