Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1580 ATGGGATTTGTAGGAGCTTTGATGATCATTATTGCCTCAATGATAGTGTGTTGTTCCTCAGCTTTGGATGAATCGGGAGTCATTTACGTGGGTGGAAAAGTGCTGTGCCAGGACTGCACCAAGGGCTGGAACGAATGGGTAAATGGTGGCAACCCTATGAAAGGAGTTAAAGTGTCCCTAACATGTATGGACAAGAGAAGTAGGGTTGTGTATTACACGAGTGATACAACAGATGAGTTGGGGCAGTACGACTTGACTGTGAAAAAGTACGTCTATGGCAAAGAATTGGATACAAAAGGATGCTCGGTGAGGTTGGTGTCGTCTTCAGATAATGTTTGCAATATCCTCACTGACTTTGGTGGTGGAAAGTCTGGCGTCAAGCTCAACTACCCAACATCAGTGTATCGCAGTTTGATCAAATACGTGCTCAACCCTTTCTATTACACCACTCCTATGTGCGATAAGCCCGACACTGACGGCTATGATGATTCTGGACCTAATAATCCCCAAGGACAAGGAGGCTATTACTAA 531 0.4482 MGFVGALMIIIASMIVCCSSALDESGVIYVGGKVLCQDCTKGWNEWVNGGNPMKGVKVSLTCMDKRSRVVYYTSDTTDELGQYDLTVKKYVYGKELDTKGCSVRLVSSSDNVCNILTDFGGGKSGVKLNYPTSVYRSLIKYVLNPFYYTTPMCDKPDTDGYDDSGPNNPQGQGGYY* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1580 176 MobiDBLite consensus disorder prediction 157 176 - -
Gso3g1580 176 Pfam Pollen protein Ole e 1 like 30 125 - -
Gso3g1580 176 PANTHER POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN 6 160 - -
Gso3g1580 176 PANTHER OS01G0164075 PROTEIN 6 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1580 Gso-Chr3 41753322 41754167 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1580 - - gmx:100803611 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1580 3 41753322 41754167 Gso3g1580 3 41753322 41754167 ECH
Gso19g1560 19 44560335 44561361 Gso3g1580 3 41753322 41754167 GST