Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1576 ATGGCATCCCAAGAACCTCAGCTTCACTTTGTTCTGTTTCCTCTCATGTCCCCAGGCCACTTGCTCCCCATGACAGACCTTGCAACAATATTAGCACAGCATAACATCATTGTTACCGTAGTCACAACCCCACATAACGCTTCTCGTTTATCAGAAACCTTTAGTCGTGCTTCAGACTCAGGGCTTAACCTCAGATTAGTTCAACTCCAATTTCCATCCCAAGATGCTGGATTTCCAGAAGGGTGTGAGAATTTTGACATGCTTCCTTCAATGGGTATGGGTTTGAATTTCTTCCTTGCTGCAAACAACTTTCTACATGAACCAGCAGAGAAAGTGTTTGAAGAGTTAACACCAAAACCAAACTGCATAATCTCTGATGTGGGTTTGGCATACACAGCCCACATCGCCACCAAATTCAACATCCCCAGAATTTCTTTCTACGGAGTTAGCTGCTTCTGTCTCTTGTGGCAGCAAAAGTTGGTCACTTCTAATCTTCTCGAGAGCATAGAAACAGATTCAGAGTACTTTCTGATACCTGACATCCCTGACAAAATTGAGATCACCAAAGAACAGACGTCAAGACCAATGCATGAAACCTGGAGCGAGTTTGTCGACAAAATGGCTGCGGCGGAAGCGGTTACTTATGGCGTGGTCGTGAATTCTTTTGAGGAGTTGGAGCCAGCATATGCAGGGGATTTCAAGAAGATCAGAAACGATAAAGTGTGGTGTGTTGGCCCTGTTTCACTCAGAAACAGGAATCAATTGGACAAGGCTCAGAGAGGGAACAAGGCCTCAAGTGATGCGCACAGTTGCATGAAGTGGCTTGATTTACAAAAGCCAAATTCAGTAGTTTACGTGTGCCTTGGAAGTATATGCAATTTAATTCCGTTGCAGTTGATAGAGCTTGGTTTGGCCTTAGAAGCATCTGAAAAACCATTCATTTGGGTTATCAGGGAGAGAAATCAAACAGAAGAGTTGAACAAGTGGATTAACGAATCAGGGTTTGAAGAGAGGACAAAGGGAGTGGGTCTTTTGATTCGGGGTTGGGCTCCTCAGGTACTAATACTATCACACCCTGCAATTGGAGGGTTCTTAACACACTGTGGTTGGAACTCTACCATCGAAGCAATATGTGCTGGAATGCCAATGCTTACGTGGCCGTTGTTTGGGGATCAATTCTTCAATGAGAAGTTCATTGTGCAGGTACTAAGAATTGGAGTGAGAGTTGGGGTGGAAACTCCTGTGAACTGGGGCAATGAAGAGAAAAGTGGGGTCTTGGTGAAGAAAGAACATGTTTTGAAGGCTATACAAGTCTTAATGGATGAGGGAAATGAAAGGGAAGAGAGAAGAAAAAGGGCTAGAGAGCTTGCGGAGATGGCTAAGAAAGCTGTAGAAGGAGGATCTTCTCACTTCAACGTAACCCAGCTAATACAAGATATCATGCAACAGTCCAACAAAGACTAG 1464 0.4413 MASQEPQLHFVLFPLMSPGHLLPMTDLATILAQHNIIVTVVTTPHNASRLSETFSRASDSGLNLRLVQLQFPSQDAGFPEGCENFDMLPSMGMGLNFFLAANNFLHEPAEKVFEELTPKPNCIISDVGLAYTAHIATKFNIPRISFYGVSCFCLLWQQKLVTSNLLESIETDSEYFLIPDIPDKIEITKEQTSRPMHETWSEFVDKMAAAEAVTYGVVVNSFEELEPAYAGDFKKIRNDKVWCVGPVSLRNRNQLDKAQRGNKASSDAHSCMKWLDLQKPNSVVYVCLGSICNLIPLQLIELGLALEASEKPFIWVIRERNQTEELNKWINESGFEERTKGVGLLIRGWAPQVLILSHPAIGGFLTHCGWNSTIEAICAGMPMLTWPLFGDQFFNEKFIVQVLRIGVRVGVETPVNWGNEEKSGVLVKKEHVLKAIQVLMDEGNEREERRKRARELAEMAKKAVEGGSSHFNVTQLIQDIMQQSNKD* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1576 487 Gene3D Glycogen Phosphorylase B; 6 272 - -
Gso3g1576 487 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Gso3g1576 487 Gene3D Glycogen Phosphorylase B; 273 465 - -
Gso3g1576 487 PANTHER GLYCOSYLTRANSFERASE 3 487 - -
Gso3g1576 487 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 482 - -
Gso3g1576 487 CDD GT1_Gtf-like 8 441 IPR002213 GO:0008194
Gso3g1576 487 PANTHER GLYCOSYLTRANSFERASE 3 487 - -
Gso3g1576 487 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 400 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1576 Gso-Chr3 41708042 41710396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1576 6 483 Glycosyltransferase AT2G36760 56.224 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1576 K13496 K22771 gmx:112997714 957.977