Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1575 ATGGGTCCCCAAGAACAACAACTCCACTTTGTCTTGTTTCCATTGATGGCTCAAGGCCACATGATCCCCATGATGGACATTGCAAAAATATTGGTGCACCGCAATGTTATTGTGACAGTAGTCACAACACCACATAATGCAGCTCGTTTCACTTCAATCTTTGATCGTTATATTGAATCTGGGTTCCAAATCAGATTAGCTCAACTTCAGTTCCCATGCAAAGAAGCTGGAGTACCAGATGGATGCGAGAATCTCGATACCATACCTTCACTTGGCATGGCTGCGGGTTTCTTCAATGCAACAAACTTTCTACGTGAGCCAGCAGAAAAACTACTTGAAGAGTTAACACCACCACCTAGCTGCATAATCTCTGATATGTGTTTACCATATACAAAACACATTGCTAGAAAATTTAATATTCCCAGGATTTCATTTGTCGGAGTAAGTTGTTTCTATCTCTTTTGCATGTCTAATGTACGCATCCATAGTGTTATCGAGAGCATAACTGCTGAATCGGAGTGCTTTGTTGTGCCTGGTATCCCTGACAAAATTGAAATGAACGTAGCTAAGACAGGAATGACAATTAATGAAGGCATGAAAGAGTTTACTAATACAATGTTTGAAGCTGAAACAGAAGCTTATGGGATGATCATGAATTCTTTTGAAGAGTTGGAGCCAGCATATGCAGGGGGATACAAGAAGATGAGAAACAATAAAGTGTGGTGTTTCGGACCTCTATCATTTACTAACAAGGATCACTTGGATAAGGCTCAAAGAGGTAAAAAGGCTTCAATTGACGATGGCCACCTGAAGAGCTGGCTTGATTGTCAAAAGCCAGGGAGTGTAATATATGCATGCTTTGGAAGCATATGCAATTTAACACCTTCACAGTTGATAGAACTTGGTTTAGCCTTGGAAGCATCAGAAAGACCCTTCATTTGGGTTTTCAGGGAAGGAAGTCAGTCAGAAGCATTGGAGAAATGGGTTAAACAAAACGGATTTGAGGAAAGAATCAGTGATCGTGGCCTTCTAATTCGGGGTTGGGCTCCTCAGTTACTAATAATATCACACCCTGCTATTGGAGGGTTCATAACACACTGTGGTTGGAACTCTACCTTAGAGACAATATGTGCTGGGGTGCCAATGGTTACATGGCCACTATTTGGTGATCAGTTTATGAATGAAAGTCTAGTTGTAGAAATATTAAAAGTTGGAGTGAAGGTTGGGGTGGAGAGACCTATTACATGGGGCAAAGAAGAGGAAATTGGTGTGCAAGTGAAGAAAAAAGATATTGAAAGGGCAATAGAAAGTTTAATGGGTGAGACAAGTGAAAGTGAAGAAAGAAGAAAAAGGATAAGAGAGCTTGCAGAGAAGGCTAAAAGAGCTGTAGAGGAAGGGGGATCTTCTCATTCTAATGTGACCTTGCTTATCGAGGATGTCATGCAAAAAGTCAAGAGAGATGTGTGA 1467 0.409 MGPQEQQLHFVLFPLMAQGHMIPMMDIAKILVHRNVIVTVVTTPHNAARFTSIFDRYIESGFQIRLAQLQFPCKEAGVPDGCENLDTIPSLGMAAGFFNATNFLREPAEKLLEELTPPPSCIISDMCLPYTKHIARKFNIPRISFVGVSCFYLFCMSNVRIHSVIESITAESECFVVPGIPDKIEMNVAKTGMTINEGMKEFTNTMFEAETEAYGMIMNSFEELEPAYAGGYKKMRNNKVWCFGPLSFTNKDHLDKAQRGKKASIDDGHLKSWLDCQKPGSVIYACFGSICNLTPSQLIELGLALEASERPFIWVFREGSQSEALEKWVKQNGFEERISDRGLLIRGWAPQLLIISHPAIGGFITHCGWNSTLETICAGVPMVTWPLFGDQFMNESLVVEILKVGVKVGVERPITWGKEEEIGVQVKKKDIERAIESLMGETSESEERRKRIRELAEKAKRAVEEGGSSHSNVTLLIEDVMQKVKRDV* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1575 488 Gene3D Glycogen Phosphorylase B; 271 464 - -
Gso3g1575 488 CDD GT1_Gtf-like 8 472 IPR002213 GO:0008194
Gso3g1575 488 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 282 398 IPR002213 GO:0008194
Gso3g1575 488 Coils Coil 428 465 - -
Gso3g1575 488 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 483 - -
Gso3g1575 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 482 - -
Gso3g1575 488 Gene3D Glycogen Phosphorylase B; 5 270 - -
Gso3g1575 488 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Gso3g1575 488 PANTHER GLYCOSYLTRANSFERASE 7 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1575 Gso-Chr3 41695017 41696755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1575 8 482 Glycosyltransferase AT2G36800 54.697 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1575 K13496 K22771 gmx:100781486 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1575 3 41695017 41696755 Gso3g1575 3 41695017 41696755 ECH