Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1574 ATGGGTGCCCAAGAACAGCAACTCCACTTTGTCTTGTTTCCATTGATGGCACAAGGCCACATGATCCCCATGATGGACATTGCAAAAATATTGGTGCACCGCAATGTTATTGTGACTGTAGTCACAACACCGCATAATGCTGCTCGTTTCACTTCAATCTTTGATCGTTATATTGAATCTGGATTTCAAATCAGATTAGCTCAACTTCAATTCCCATGCAAAGAAGCTGGAGTCCCAGATGGATGCGAGAATCTCGATTCCATACCTTCACTTGGCATGGCCGCGGGTTTCTTCAATGCAACAAACTTTCTACGTGAGCCAGCGGAAAAACTGTTTGAAGAGCTAACACCACCACCAAGCTGCATAATCTCTGATATGTGTTTACCATACACAAACCACATTGCTAAAAAATATAACATTCCCAGGATTTCATTTGTCGGAGTAAGTTGCTTCTATCTCTTTTGCATGTCTAATGTACGCATCCATAATGTTATGGAGGGAATAGCTAATGAATCGGAGCACTTTGTTGTGCCTGGTATTCCTGACAAAATTGAAACAACCATGGCTAAGACAGGACTAGCAATGAATGAAGAAATGCAACAGGTCACTGATGCAGTGTTTGCAGTTGAAATGGAAGCTTATGGGATGATCATGAATTCATTTGAAGAGTTGGAGCCAGCATATGCAGGTGGATACAAGAAGATGAGAAACGATAAAGTGTGGTGTTTGGGACCACTGTCATATAGCAACAAGGATCAATTGGATAAGTCTCAGAGAGGTAAAAAGGCCACAATTGACGAGTACCACCTGAAGAGCTGGCTTGATTGTCAAAAGCCAGGGAGTGTAATATATGCATGCTTTGGAAGCATATGCAATTTAACAACACCACAGTTGATAGAGCTTGGTTTAGCCTTGGAAGCATCAGAAAGACCCTTCATTTGGGTTTTCAGGGAAGGAAGTCAGTCCGAAGAATTGGGGAAATGGGTTAGTAAAGATGGATTTGAGGAAAGAACCAGTGGTCGTGGCCTTCTAATTCGGGGTTGGGCTCCTCAGTTACTAATATTATCACACCCTGCTGTTGGAGGGTTCATAACACACTGTGGTTGGAACTCTACCTTAGAAGCAATATGTGCTGGGGTGCCAATGGTTACATGGCCACTATTTGCTGATCAGTTTTTGAATGAAAGTCTAGTTGTGGAAATATTACAAGTTGGAGTGAAGGTTGGGGTGGAGAGTCCTGTGACATGGGGCAAAGAAGAGGAAGTTGGTGTGCAAGTGAAGAAAAAAGATGTTGAGAGGGCGATCACAAAGTTAATGGATGAGACAATCGAACGAGAGGAAAGAAGAAAGAGGATAAGAGATCTTGCTGAGAAGGCTAAAAGAGCCACAGAGAAAGGGGGATCATCTCATTCTAATGTGACCTTGCTTATCCAGGACATCATGCAAAAAATCAAACGAGATGTATGA 1467 0.4254 MGAQEQQLHFVLFPLMAQGHMIPMMDIAKILVHRNVIVTVVTTPHNAARFTSIFDRYIESGFQIRLAQLQFPCKEAGVPDGCENLDSIPSLGMAAGFFNATNFLREPAEKLFEELTPPPSCIISDMCLPYTNHIAKKYNIPRISFVGVSCFYLFCMSNVRIHNVMEGIANESEHFVVPGIPDKIETTMAKTGLAMNEEMQQVTDAVFAVEMEAYGMIMNSFEELEPAYAGGYKKMRNDKVWCLGPLSYSNKDQLDKSQRGKKATIDEYHLKSWLDCQKPGSVIYACFGSICNLTTPQLIELGLALEASERPFIWVFREGSQSEELGKWVSKDGFEERTSGRGLLIRGWAPQLLILSHPAVGGFITHCGWNSTLEAICAGVPMVTWPLFADQFLNESLVVEILQVGVKVGVESPVTWGKEEEVGVQVKKKDVERAITKLMDETIEREERRKRIRDLAEKAKRATEKGGSSHSNVTLLIQDIMQKIKRDV* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1574 488 Coils Coil 445 465 - -
Gso3g1574 488 Gene3D Glycogen Phosphorylase B; 5 271 - -
Gso3g1574 488 Gene3D Glycogen Phosphorylase B; 272 464 - -
Gso3g1574 488 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 282 397 IPR002213 GO:0008194
Gso3g1574 488 CDD GT1_Gtf-like 8 440 IPR002213 GO:0008194
Gso3g1574 488 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 483 - -
Gso3g1574 488 PANTHER GLYCOSYLTRANSFERASE 7 483 - -
Gso3g1574 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 482 - -
Gso3g1574 488 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1574 Gso-Chr3 41687345 41688957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1574 8 482 Glycosyltransferase AT2G36800 53.862 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1574 K13496 K22771 gmx:100780411 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1574 3 41687345 41688957 Gso3g1574 3 41687345 41688957 ECH