Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1573 ATGGTTTTCCAAACAAACATTAATCCTCACTTCGTATTGTTTCCTCTCATGGCTCAAGGCCACATGATCCCCATGATGGACATTGCAAGACTATTGGCACGGCGTGGTGTGATTGTTTCCATATTCACCACCCCAAAAAATGCATCACGATTCAATTCTGTTCTTTCTCGTGATGTTTCATCAGGCCTCCCAATCCGGCTAGTACAACTCCATTTTCCATCCAAAGAAGCAGGACTACCTGAAGGGTGTGAGAATTTGGACATGGTAGCTTCAAACGATTTGTACAAAATATTCCACGCCATCAAGCTGCTCCATAAGCCAGCAGAGGAGTTCTTTGAAGCACTAACACCCAAACCAAGTTGCATAATCTCGGACTTTTGCATTCCTTGGACTGCTCAAGTAGCTGAAAAGCATCATATTCCAAGGATTTCATTCCACGGTTTTTCTTGCTTCTGCCTCCATTGCCTGTACCAGATACACACATCAAAGGTTTGTGAAAGCATCACTTCAGAATCCGAGTACTTCACTATTCCTGGCATACCTGACAAAATTCAAGTTACCAAAGAGCAGCTACCTGCAGGACTCTCTAATGAATTGAAGGACTTTGGAGAGCAGGTGATTGATGCTGACATAAAGTCATATGGGGTAATCATAAATACTTTTGAAGAGTTGGAGAAGGCATATGTGAGGGAATACAAGAAGGTGAGAAACGATAAGGTGTGGTGCATTGGTCCTGTTTCATTATGTAACAAAGATGGCTTGGATAAGGCTCAAAGAGGCAACCGGGCCTCAATTAATGAGCATCATTGCTTGAAGTGGTTAGATTTGCAGCAACCCAAGTCTGTGGTTTATGTTTGTTTTGGAAGCCTGTGCAATTTGATTCCTTCACAACTTGTGGAGCTGGCCTTGGCCATAGAAGATAGTAAAAAACCATTTGTATGGGTCATTAGGGAGGGAAGTAAGTACCAAGAGTTGGAAAAATGGATCAGTGAAGAAGGGTTTGAGGAAAGGACCAAAGGGAGAGGCCTTATAATTCGAGGTTGGGCTCCACAGGTACTAATATTATCGCACCCTGCCATTGGAGGATTCTTAACACATTGTGGTTGGAATTCAACACTTGAAGGGATAAGTGTTGGAGTGCCAATGGTTACCTGGCCTCTATTTGCTGATCAATTTTTAAATGAAAAGCTCGTTACTCAAGTGTTGAAGATTGGTGTGAGTGTTGGGGCAGAAGTTCCAATGAATTGGGGAGAGGAAGAGAAAACTGGTGTGTTGGTGAAGAAGAAGAACATTGAGAGGGCAATATGCATGGTGATGGACAATGATGAAGAAGAAAGCAAAGAGAGAAGAGAAAGGGCAACCAAACTCTGTGAGATGGCAAAGAAAGCGGTTGAAAAAGGGGGGTCTTCCCATCTTGACATGACTTTGCTTATACAAGACATCATGCAACAATCAAGTAGCAAGGAGGATGTAAAGTGTTGA 1482 0.4278 MVFQTNINPHFVLFPLMAQGHMIPMMDIARLLARRGVIVSIFTTPKNASRFNSVLSRDVSSGLPIRLVQLHFPSKEAGLPEGCENLDMVASNDLYKIFHAIKLLHKPAEEFFEALTPKPSCIISDFCIPWTAQVAEKHHIPRISFHGFSCFCLHCLYQIHTSKVCESITSESEYFTIPGIPDKIQVTKEQLPAGLSNELKDFGEQVIDADIKSYGVIINTFEELEKAYVREYKKVRNDKVWCIGPVSLCNKDGLDKAQRGNRASINEHHCLKWLDLQQPKSVVYVCFGSLCNLIPSQLVELALAIEDSKKPFVWVIREGSKYQELEKWISEEGFEERTKGRGLIIRGWAPQVLILSHPAIGGFLTHCGWNSTLEGISVGVPMVTWPLFADQFLNEKLVTQVLKIGVSVGAEVPMNWGEEEKTGVLVKKKNIERAICMVMDNDEEESKERRERATKLCEMAKKAVEKGGSSHLDMTLLIQDIMQQSSSKEDVKC* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1573 493 Gene3D Glycogen Phosphorylase B; 7 271 - -
Gso3g1573 493 PANTHER GLYCOSYLTRANSFERASE 4 492 - -
Gso3g1573 493 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 483 - -
Gso3g1573 493 Gene3D Glycogen Phosphorylase B; 272 465 - -
Gso3g1573 493 CDD GT1_Gtf-like 9 473 IPR002213 GO:0008194
Gso3g1573 493 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 279 401 IPR002213 GO:0008194
Gso3g1573 493 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Gso3g1573 493 PANTHER GLYCOSYLTRANSFERASE 4 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1573 Gso-Chr3 41679910 41681692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1573 10 489 Glycosyltransferase AT2G36750 57.350 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1573 K13496 K22771 gmx:100802029 1006.13