Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1572 ATGGTTTTCCAAACAAACAATAATCCTCACTTTATCTTGTTTCCCTTAATGGCTCAAGGCCATATCATCCCCATGATGGACATAGCAAGACTATTGGCTCACCGTGGTGTGATTGTTACAATATTCACCACCCCAAAAAATGCATCACGTTTTAATTCTGTTCTTTCTCGTGCTATTTCATCAGGCCTCCAAATCCGCCTAGTACAACTCCACTTTCCATCCAAAGAAGCAGGACTACCTGAAGGGTGCGAGAATTTCGACATGGTAACATCAATCGATATGGTGTACAAAATGTTCAATGTCATCAACATGCTCCATAAGCAAGCAGAGGAGTTTTTTGAAGCACTAACACCCAAACCAAGTTGCATAATCTCTGACTTTTGCATTCCTTGGACTGCTCAAGTAGCTCAAAAGCATGGTATTCCAAGGATTTCGTTCCACGGATTTGCTTGCTTCTGCCTCCATTGCATGCTCATGGTACACACTTCAAATGTTTGTGAAAGTACGGCTTCAGAATTCGAGTACTTCACCATCCCCGGCATACCTGACCAAATTCAAGTTACCAAAGAGCAGATACCTATGATGATCTCAAATTCAGATGAAGAAATGAAGCACTTTAGGGAGCAGATGCGTGATGCTGACATAAAGTCATATGGGGTAATCATAAATACTTTTGAAGAGTTGGAGAAGGCGTATGTGAGGGATTACAAGAAGGTGAGAAATGATAAGGTGTGGTGCATTGGTCCTGTTTCATTATGTAACCAAGATAATTTGGATAAGGTTCAAAGAGGCAACCATGCCTCAATTAATGAGCACCATTGCTTGAAATGGCTAGATTTGCAGCCACCAAAGTCTGCGGTTTATGTTTGTTTTGGAAGCTTGTGCAATTTGATTCCTTCACAACTTGTGGAGCTGGCCTTGGCCTTGGAAGATACTAAGAAACCATTTGTATGGGTCATTAGGGAGGGAAATAAGTTCCAAGAGTTGGAAAAAAAATGGATCAGTGAAGAAGGGTTTGAGGAAAGGACCAAAGGGAGAGGCCTTATAATTCGAGGTTGGGCTCCACAAGTGCTAATATTATCACACCCTTCCATTGGAGGATTCTTAACACACTGTGGTTGGAATTCAACACTTGAAGGGATAAGTGCTGGCGTGCCAATGATTACGTGGCCTCTATTTGCTGATCAATTTTTGAATGAGAAGCTCGTCACTCAAGTGTTGAAGATTGGTGTGAGTGTTGGGATGGAGGTTCCCATGAAGTTTGGAGAGGAACAGAAGACAGGGGTGTTGGTTAAGAAGGAAGATATTAAGAGGGCAATATGCATTGTGATGGACGATGATGGAGAAGAAAGCAAAGACAGAAGAGAAAGGGCAACCAAACTCAGTGAGATGGCAAAGAGAGCAGTTGAAAAAGAAGGCTCTTCTCATCTTGACATGACTTTGCTTATTCAAGACATCATGCAACAATCAAGTAGCAAGGAGGAAGTAAGGACGAGCCTTAAAGAGTCGCAATTTTCTTGTAAAGCTTGA 1530 0.4196 MVFQTNNNPHFILFPLMAQGHIIPMMDIARLLAHRGVIVTIFTTPKNASRFNSVLSRAISSGLQIRLVQLHFPSKEAGLPEGCENFDMVTSIDMVYKMFNVINMLHKQAEEFFEALTPKPSCIISDFCIPWTAQVAQKHGIPRISFHGFACFCLHCMLMVHTSNVCESTASEFEYFTIPGIPDQIQVTKEQIPMMISNSDEEMKHFREQMRDADIKSYGVIINTFEELEKAYVRDYKKVRNDKVWCIGPVSLCNQDNLDKVQRGNHASINEHHCLKWLDLQPPKSAVYVCFGSLCNLIPSQLVELALALEDTKKPFVWVIREGNKFQELEKKWISEEGFEERTKGRGLIIRGWAPQVLILSHPSIGGFLTHCGWNSTLEGISAGVPMITWPLFADQFLNEKLVTQVLKIGVSVGMEVPMKFGEEQKTGVLVKKEDIKRAICIVMDDDGEESKDRRERATKLSEMAKRAVEKEGSSHLDMTLLIQDIMQQSSSKEEVRTSLKESQFSCKA* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1572 509 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 405 IPR002213 GO:0008194
Gso3g1572 509 Gene3D Glycogen Phosphorylase B; 2 275 - -
Gso3g1572 509 Gene3D Glycogen Phosphorylase B; 276 470 - -
Gso3g1572 509 PANTHER GLYCOSYLTRANSFERASE 5 498 - -
Gso3g1572 509 CDD GT1_Gtf-like 9 465 IPR002213 GO:0008194
Gso3g1572 509 MobiDBLite consensus disorder prediction 490 509 - -
Gso3g1572 509 PANTHER GLYCOSYLTRANSFERASE 5 498 - -
Gso3g1572 509 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
Gso3g1572 509 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1572 Gso-Chr3 41674881 41676555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1572 10 493 Glycosyltransferase AT2G36760 55.052 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1572 - - gmx:100778817 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1572 3 41674881 41676555 Gso3g1572 3 41674881 41676555 ECH