Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1557 ATGGGGATACTGCACGACGACGTAGTGATAATCAGAGAGCCAGAGAAAGAAGGTGAAGCAACCGTCATAACCGTCAATTGCCCCGACAAGACCGGTCTGGGTTGTGATTTGTGTCGCATCATTCTCTTCTTCGGTCTTAGCATTGTCCGAGGAGACGTTTCCACCGACGGAAAATGGTGCTACATAGTATTCTGGGTGGTGGGGAAGCAAAGGATGAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGAGGCGTGCCCTACTTGTTCTTCAGCTTCTGGAATTTCCTATTACCGTTCAGAATTGCAGCCTCCTAAACCACCAAATGTATTCCTTTTGACATTTTGTTGCCACGACCGTAAAGGCCTTTTACACGATGTTACAGAGGTTCTTAGTGAGCTAGAGCTCATCATACACAAAGTGAAGGTGTCTACTACACCTGATGGCAAAGTGGTAGATCTGTTTTTCATCACGGATACAAGGGAACTTCTACATACAAAGAAGAGAAGAGATGACACAATCGAACAGTTGGCAGCTATTTTGGGGGATCCCTTAATTGCCATTGACATTGAGTTGGTTGGCCCAGAAACCGCTGCTTGTTCTCAAGCATCTTCATTCCTTCCAAGTGCAATTTCAGAAGATATGTTTGATTTGGAATTACCTGATTCAATACGAAGTGGGACTTCCACATCAGATTCGGTTTCTATTACGATGGACAATTCGCTGAGTCCTGCTCACACGCTTGTCCAAATTATATGTCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTACAATATTCAGATTTCTTATGGGAGATTCTCACCAAAACCCAGAGGAAAATGTGAGCTTGACTTGTTCATAGTGCAAGCAGATGGGAAAAAGATAGTTGACCCCAGCAAGCAGAAGTCTTTGACATCACGCCTTAGGATGGAACTACTTCGTCCGCTCAGAATAACTGTTGTAAGCAGGGGTCCTGATACAGAGCTGCTGGTTGCAAACCCTGTGGAGTTGTCGGGCAAAGGACGACCTCTTGTTTTTTATGATATTACTCTTGCTCTCAAAATGCTTGGCCCTTGCATATTTTCGGCTGAAGTTGGAAGACATGTGGTTGGAGACCGCGAGTGGGAAGTTTATAGAATCTTGCTTGATGAAGGGGAGGGTTTATCCATTCCAAGGAATAAGATTGAGAAAGGAGTTTGGAAGATGTTGATGGGTTGGGAGTGA 1239 0.4431 MGILHDDVVIIREPEKEGEATVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVVGKQRMRWSLLKKRLIEACPTCSSASGISYYRSELQPPKPPNVFLLTFCCHDRKGLLHDVTEVLSELELIIHKVKVSTTPDGKVVDLFFITDTRELLHTKKRRDDTIEQLAAILGDPLIAIDIELVGPETAACSQASSFLPSAISEDMFDLELPDSIRSGTSTSDSVSITMDNSLSPAHTLVQIICQDHKGLLYDIMRTLKDYNIQISYGRFSPKPRGKCELDLFIVQADGKKIVDPSKQKSLTSRLRMELLRPLRITVVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGPCIFSAEVGRHVVGDREWEVYRILLDEGEGLSIPRNKIEKGVWKMLMGWE* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1557 412 SUPERFAMILY ACT-like 244 298 IPR045865 -
Gso3g1557 412 SUPERFAMILY ACT-like 18 81 IPR045865 -
Gso3g1557 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Gso3g1557 412 SUPERFAMILY ACT-like 107 180 IPR045865 -
Gso3g1557 412 Pfam ACT domain 112 168 IPR002912 -
Gso3g1557 412 ProSiteProfiles ACT domain profile. 247 328 IPR002912 -
Gso3g1557 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 412 IPR040217 -
Gso3g1557 412 Gene3D - 108 192 - -
Gso3g1557 412 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1557 Gso-Chr3 41511857 41514992 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1557 - - gmx:100797226 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1557 3 41511857 41514992 Gso3g1557 3 41511857 41514992 ECH
Gso19g1537 19 44295564 44298901 Gso3g1557 3 41511857 41514992 GST
Gso3g1557 3 41511857 41514992 Gso10g0504 10 5541506 5545267 PCT
Gso10g0504 10 5541506 5545267 Gso3g1557 3 41511857 41514992 PCT