Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1527 ATGGATACACGAAGTGAAATGAGGCATTCAAAGTTCAAGAGGATTTGTGTGTTCTGTGGGAGTAGCCCCGGCAAGAAGAGTACCTACCAAGATGCTGCCATTGAACTTGGCAACGAATTGGTCTCAAGGAACATCGATCTGGTGTATGGAGGGGGAAGCATTGGTCTAATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTCGCCATGTCATCGGAGTTATTCCCAAGACCCTCATGCCTCGAGAGCTAACTGGTGAAACAGTGGGAGAAGTAAAAGCTGTTGCTGATATGCACCAAAGGAAGGCAGAGATGGCCAAGCATTCAGACGCCTTTATTGCCTTACCAGGTGGATATGGGACTCTAGAGGAGCTTCTTGAAGTCATAACCTGGGCACAACTTGGTATTCATGACAAGCCGGTGGGATTAGTAAATGTTGATGGATACTTTAATTCCTTGCTGTCATTTATTGACAAAGCTGTGGAAGAGGGATTTATCAGTCCAAATGCTCGCCACATAATTGTATCAGCACCCACAGCAAAAGAGTTGGTGAAGAAATTGGAGGATTACGTTCCCTGTCATGAGGGTGTTGCTTCCAAGTTGAGCTGGCAGATAGAACAGCAGCTTGCTTACCCTCAAGATTATGACATGTCAAGGTAG 660 0.4591 MDTRSEMRHSKFKRICVFCGSSPGKKSTYQDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEDYVPCHEGVASKLSWQIEQQLAYPQDYDMSR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1527 219 PANTHER LOG FAMILY PROTEIN YJL055W 1 219 - -
Gso3g1527 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Gso3g1527 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Gso3g1527 219 Gene3D - 2 189 - -
Gso3g1527 219 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 219 - -
Gso3g1527 219 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1527 Gso-Chr3 41150226 41154484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1527 K22522 - gmx:100787375 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1527 3 41150226 41154484 Gso3g1527 3 41150226 41154484 ECH
Gso19g1513 19 43985096 43989359 Gso3g1527 3 41150226 41154484 GST