Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1415 ATGGAGGGTGGGAGTAGTTTCAGGATTGGTAGTTCATCCATTTGGAGGGTCGACAGTGACACGAATATCTTCTCAAACTCTTTCCACCAAGAAGATGATGAAGAGGCTCTCAAATGGGCTGCCATTCAGAAACTTCCTACCGTTGCACGCTTGAGGAAAGCTTTGCTGACTTCATCCGAAGGGGAAATCAGCGAGATCGATGTGAAGAAACTTGGGTTGCAAGAAAGGAGAGCTTTACTTGAAAGGCTGGTGAGAACTGTTGAAGATGACAATGAGAAGTTTTTGCTCAAGCTCAGGAACCGAATTGATAGAGTTGGAATCCATCTTCCTACTGTAGAGGTTCGGTTTGAGAACTTGAACGTGGAAGCAGAAGTTCATGTCGGAACTAGAGCCTCACCTACCTTCTTTAACTTTATGTTTAATATAGTGGAGGGTTTGTTGAACTTTCTTCATATTCTTCCAAGTAGAAAACAACATATAACTATTATCCGGGATGTTAGTGGAATAATAAAGCCTGGCAGAATGACATTGCTTTTGGGCCCTCCAAGTTCAGGAAAAACAACGCTGTTGTTGGCGTTGGCTGCAAAACTTGATCCAAAATTAAAGTTCTCTGGAAAGGTGACTTACAATGGTCATGAGATGAATGAGTTTGTACCCCAAAGAACTGCTGCTTATGTCAATCAAAATGATCATCATGTTGCAGAATTGACAGTCAGAGAGACCTTGGCCTTCTCAGCTAGAGTCCAAGGAGTTGGAACTCACTATGATTTGCTTGCAGAATTATCTAGAAGAGAAAAAGAGGCAAATATCAGGCCTGATCCAGATATTGATGTCTACATGAAGGCTGTAGCAACTGAAGGCCAGAAGGCAAATTTGATAACAGATTATGTCCTCAGGATTTTGGGACTGGAGACCTGTGCTGATACTATTATAGGAAATGAAATGTTAAGAGGGATCTCTGGTGGACAAAAGAAACGCCTTACAACAGGAGAAATGCTGGTTGGACCAACTAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACTTTCCAAATTGTGAATTCAGTCAAGCAATGTGTTCATATTCTCAAAGGAACCGCAGTCATCTCACTCCTGCAGCCCACACCAGAGACTTACAATCTTTTTGATGACATTATACTACTCTCTGATAGTCATATTGTGTACCAGGGTCCCCGCGAACATGTGCTGGAATTTTTCAAATCAATGGGTTTTAAATGTCCTGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAGGATCAGGAGCAGTACTGGGCAGACAAAGATCAGCCTTATAGATTTGTCACATCCAAAGAGTTCTCAGAGGCACATAGATCATTTCATGTTGGAAGAAGCCTTGTTGAAGAACTTGCTACTGAATTTGACAAGTCTAAGAGCCACCCAGCTGCTTTGACAACCAAAAAGTATGGAGTAGGAAAATGGGAACTGTTCAAAGCTTGTTTATCACGAGAATATTTACTTATCAAGCGCCATTCATTTGTTTACACCTTCAAGCTTAGTCAACTTTCTGTAGCAGCATTTGTTGCCATGACTGTTTTCCTCCAGACTGAGATGCACAGAGATTCAGTGATTGATGGCGGAATATATGTGGGTGCATTGTTCTATGGCCTTGTTGTGATTATGTTCAATGGAATGCCTGAACTTTCCATGGCTGTTTCGAGGCTTCCTGTTTTTTACAAGGAAAGGGATAATCTATTTTTTCCTTCATGGGCATATGCTCTTCCTGCATGGCTCCTAAAAATCCTCATGAGTTTTGTGGAAGTGGGTGTTTGGGTATTCCTCACCTACTATGTCATTGGTTTTGATCCATATGTTGGAAGATTTTTTAGGCAATATCTTGTTCTTGTACTAGTAAAGCAGATGGCTTCAGCATTATACCGATTTGTTGCAGCACTTGGGAGGGAATCGACAGTAGCTCTAACACTTGGGTCGGGTACAAATGCCACCCTTTTGGCTATGAGTGGTTTTGTCCTATCAAAAGACAATATAAAAAAATGGTGGCTATGGGGCTTCTGGATGTCACCTACGATGTATGGACAGAATGCCATGGTAAATAATGAATTCCTTGGAAAGAGATGGAGACATATTTTACCTAACTCGACGGAGCCGCTAGGCATTGAAGTTTTGAGATCCCGGGGATTCTTCACTCAGTCATACTGGTATTGGATAGGTGTTGGGGCGTTGATTGGATATACATTACTTTTCAATTTTGGATACATCCTTGCTCTCATGTACTTGAGTCCACCCGGAAAGCACCGGGCTGTTTTATCAGAGGAACCTCAAAGCAATGAACAGAATGGTGGTAGCAAAAAAGGAACTAATGTGCTGAGGCACATAAAATATAGTTTATCTCAGCACTCCAATAAAGGGAGAAAAGGCAAAAGGGTAAGTGGAAGCACATCTTCTCATACTTTACCTGCTAGTGGAATGGTTCTTCCTTTTCAGCCACATTCTATCACCTTTGATGAAGTAACATATGCTGTGGACATGCCACAGGAAATGAGGGACCAAGGTGTTGTCAAGGATAAATTGGTTCTTTTGAAGGGTGTCAGTGGAGCTTTTAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTCACTGGTGCAGGCAAAACAACTCTGATGGATGTACTTGCTGGTAGAAAAACTGGAGGATATGTTGGAGGTAACATCAAAATCTCTGGGTATCGGAAGAAGCAAGAAACATTTGCAAGGATTTCTGGATACTGTGAGCAAAATGACATTCACTCTCCTCATGTTACTGTGTATGAATCCTTGCTTTATTCTTCTTGGCTCCGATTGTCTCCAGATATCAATGTTGAAACCAGGAAGATGTTCATTGAGGAAGTCATGGAACTTGTGGAATTGAAACCACTAAGGCATGTATTAGTCGGATTTCCTGGTGTTACTGGTCTCTCAACAGAGCAAAGAAAAAGGTTGACTATTGCAGTTGAACTTGTAGCAAATCCTTCCATAATATTCATGGATGAGCCAACTTCTGGGTTAGATGCAAGAGCTGCTGCTATTGTCATGAGAATAGTTAGGAACACAGTAGACACAGGAAGAACAGTTGTTTGTACTATCCATCAGCCCAGCATGGACATATTTGAATCTTTTGATGAGCTTTTCCTAATGAAGCAAGGAGGGCAAGAGATTTATGTGGGACCACTTGGACACCATTCATCCCATTTAATTAGTTACTTTGAGGGAATCCAAGGTGTCAGTGAGATTAAAGCTGGCTACAATCCAGCAACATGGGTGTTGGAAGTTACAAATTCATCAAAAGAAATGGAACTGGGGATTGATTTTGCCGAGGTGTTCAAAAATTCAGAGTTATGCAGGAGAAACAAAGAACTTGTTAAAGAATTGAGTACTCCAGCCCCTGGTTCGAAAGACCTTTATTTTCCTTCACAATACTCAACTTCCTTCTTCATGCAATGCATGGCTTGCTTGTGGAAACAACATAGGTCTTATTGGCGCAATACTCGATACACTGCCCTATCATTTATTTACTCAACTACTTTAGCTGTTTTGTTAGGGAGTATGTTTTGGAACCTTGGCTCTAAAATTGAAAAGCAACAAGATCTTTTAAACGCCTTGGGCTCCATGTATGTTGCTGTCCTCCTTATTGGCATTAAGAATGCTTATTCAGTGCAGCCAGTGGTTGCTGCTGAGCGAATAGTCTTTTATAGGGAAAGAGCAGCTGGAATGTATTCTGCTTTACCATATGCTTTTGCTCAGGTTCTGATTGAGATTCCATATGTACTTGTACAAGCTGTGGTCTATAGCCTTATAGTTTATGCAATGATTGGTTTTGAGTGGACTGTGGCTAAATTTTTCTGGTTCCTATTCTTCATGTACTTCAACTTCCTGTGCTTCACCTACTATGGCATGATGTCAATGGCAGTGACCCCAAACCAACACATTTCTTCTATAGTTTCAACTGGATTCTATTCAGCATGGAATATCTTCTCAGGGTTCATAATCCCACGGCCTAGAATCCCAGTGTGGTGGAGGTGGTACAGTTGGGCAAATCCAATTGCTTGGAGCATGTATGGATTGGTGGCTTCACAATATGGAGATATAAAGGAAAACATCGAATCCACCGACGGGACAACAACAGTGGAAGACTTTGTAAGAAGTTACTTTGGTTACAAGCATGATTTTCTGGGAGTGGTTGCAACTGTGATTGCTGCATTTGCAGTAGTTTTTGCATTGGTCTTTGCCATATCAATGAAGATGTTTAATTTCCAAAGGCGTTAA 4329 0.4135 MEGGSSFRIGSSSIWRVDSDTNIFSNSFHQEDDEEALKWAAIQKLPTVARLRKALLTSSEGEISEIDVKKLGLQERRALLERLVRTVEDDNEKFLLKLRNRIDRVGIHLPTVEVRFENLNVEAEVHVGTRASPTFFNFMFNIVEGLLNFLHILPSRKQHITIIRDVSGIIKPGRMTLLLGPPSSGKTTLLLALAAKLDPKLKFSGKVTYNGHEMNEFVPQRTAAYVNQNDHHVAELTVRETLAFSARVQGVGTHYDLLAELSRREKEANIRPDPDIDVYMKAVATEGQKANLITDYVLRILGLETCADTIIGNEMLRGISGGQKKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIVNSVKQCVHILKGTAVISLLQPTPETYNLFDDIILLSDSHIVYQGPREHVLEFFKSMGFKCPERKGVADFLQEVTSRKDQEQYWADKDQPYRFVTSKEFSEAHRSFHVGRSLVEELATEFDKSKSHPAALTTKKYGVGKWELFKACLSREYLLIKRHSFVYTFKLSQLSVAAFVAMTVFLQTEMHRDSVIDGGIYVGALFYGLVVIMFNGMPELSMAVSRLPVFYKERDNLFFPSWAYALPAWLLKILMSFVEVGVWVFLTYYVIGFDPYVGRFFRQYLVLVLVKQMASALYRFVAALGRESTVALTLGSGTNATLLAMSGFVLSKDNIKKWWLWGFWMSPTMYGQNAMVNNEFLGKRWRHILPNSTEPLGIEVLRSRGFFTQSYWYWIGVGALIGYTLLFNFGYILALMYLSPPGKHRAVLSEEPQSNEQNGGSKKGTNVLRHIKYSLSQHSNKGRKGKRVSGSTSSHTLPASGMVLPFQPHSITFDEVTYAVDMPQEMRDQGVVKDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYVGGNIKISGYRKKQETFARISGYCEQNDIHSPHVTVYESLLYSSWLRLSPDINVETRKMFIEEVMELVELKPLRHVLVGFPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRIVRNTVDTGRTVVCTIHQPSMDIFESFDELFLMKQGGQEIYVGPLGHHSSHLISYFEGIQGVSEIKAGYNPATWVLEVTNSSKEMELGIDFAEVFKNSELCRRNKELVKELSTPAPGSKDLYFPSQYSTSFFMQCMACLWKQHRSYWRNTRYTALSFIYSTTLAVLLGSMFWNLGSKIEKQQDLLNALGSMYVAVLLIGIKNAYSVQPVVAAERIVFYRERAAGMYSALPYAFAQVLIEIPYVLVQAVVYSLIVYAMIGFEWTVAKFFWFLFFMYFNFLCFTYYGMMSMAVTPNQHISSIVSTGFYSAWNIFSGFIIPRPRIPVWWRWYSWANPIAWSMYGLVASQYGDIKENIESTDGTTTVEDFVRSYFGYKHDFLGVVATVIAAFAVVFALVFAISMKMFNFQRR* 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1415 1442 Pfam Plant PDR ABC transporter associated 716 778 IPR013581 -
Gso3g1415 1442 Pfam ABC-transporter N-terminal 88 138 IPR029481 -
Gso3g1415 1442 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 420 IPR003439 GO:0005524
Gso3g1415 1442 Gene3D - 150 462 IPR027417 -
Gso3g1415 1442 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1442 - -
Gso3g1415 1442 Pfam ABC-2 type transporter 378 469 IPR043926 GO:0140359
Gso3g1415 1442 SMART AAA_5 172 404 IPR003593 -
Gso3g1415 1442 SMART AAA_5 879 1071 IPR003593 -
Gso3g1415 1442 Pfam ABC transporter 870 1022 IPR003439 GO:0005524
Gso3g1415 1442 Pfam ABC transporter 164 345 IPR003439 GO:0005524
Gso3g1415 1442 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1442 - -
Gso3g1415 1442 CDD ABCG_PDR_domain2 839 1077 IPR034003 -
Gso3g1415 1442 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 842 1094 IPR003439 GO:0005524
Gso3g1415 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 420 IPR027417 -
Gso3g1415 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 858 1078 IPR027417 -
Gso3g1415 1442 Pfam ABC-2 type transporter 499 711 IPR013525 GO:0016020|GO:0140359
Gso3g1415 1442 Pfam ABC-2 type transporter 1168 1381 IPR013525 GO:0016020|GO:0140359
Gso3g1415 1442 Gene3D - 839 1085 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1415 Gso-Chr3 40106696 40116268 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1415 K08711 - gmx:100791601 2820.8